R Observatory: Metrics for mapfuser version 0.1.2

Balamuta, James Joseph

doi:10.5281/zenodo.21843040

This package was removed from CRAN on 2019-02-14. Its history is shown below.

Reason: the request of the maintainer

Details below reflect version 0.1.2, its last release before removal.

mapfuser

0.1.2Package record

Construct Consensus Genetic Maps and Estimate Recombination Rates

0packages depend

–downloads / year

–test coverage

–flavors OK

Overview

About

Maintained by Dennis van MuijenCRAN page ↗

Construct consensus genetic maps with LPmerge, see Endelman and Plomion (2014) doi:10.1093/bioinformatics/btu091 and model the relationship between physical distance and genetic distance using thin-plate regression splines, see Wood (2003) doi:10.1111/1467-9868.00374. Perform quality control on input data and visualise intermediate steps.

Install

R (source archive)

url <- "https://cran.r-project.org/src/contrib/Archive/mapfuser/mapfuser_0.1.2.tar.gz"
pkgFile <- "mapfuser_0.1.2.tar.gz"
download.file(url, pkgFile)
install.packages(pkgFile, type = "source", repos = NULL)

This package is no longer on CRAN, so install.packages() cannot fetch it by name. This downloads the last archived source (0.1.2) and builds it locally. Install its dependencies first, and note that building from source needs the usual compiler toolchain.

Health

CRAN checks

CRAN check results are not tracked yet.

Advisories

none known

How this is measured·How advisories are found

Documentation

In release 0.1.2

READMENoVignettesYes · 1 · dynamicNEWSNoCitation fileNoWebsitenot declared in DESCRIPTION

Help pages: 19
Examples that run: 33%3 run in a plain check · 6 never run
Exported functions with examples: 88%
Documented parameters: 100%
Return-value docs: 88%
Help pages citing references: 5%

How these are measured

Downloads

mapfuser Releases R versions

Daily download trend is not available in this view yet.

Compare downloads with other packages →

How downloads are counted

Dependencies

Declared dependencies

13 external dependencies (excludes base and recommended)

Depends (1)

igraph

Imports (12)

dplyr ggplot2mgcvdoParallelparallelforeach stringi plotly visNetwork LPmerge lazyeval tidyr

LinkingTo (0)

none

Suggests (2)

knitr rmarkdown

Enhances (0)

none

Dependency license breakdown →

Reverse dependencies

0direct

–indirect (not tracked)

Nothing depends on this yet.

How these are counted

Code & Tests

Datasets

People & History

People (3)

Dennis van Muijen

Contributor

Ram Kumar Basnet

Contributor

Nathalie J. Dek

Contributor

Maintainer since 0.1.2 (2017)

Releases (1)

R
R 3.6.0 released · 2019-04-26
archivedRemoved from CRAN
2019-02-14
the request of the maintainer
R
R 3.5.0 released · 2018-04-23
0.1.2
record
2017-10-10
R
R 3.4.0 released · 2017-04-21

Package metadata

First published: 2017-10-10
Total releases: 1 / 9 yrs
License: GPL-3 OSI

Cite

Cite this package

Run in R for the authors' preferred citation:

citation("mapfuser")

Format

Muijen, D. v., Basnet, R. K., & Dek, N. J. (n.d.). mapfuser: Construct Consensus Genetic Maps and Estimate Recombination Rates (Version 0.1.2) [Computer software]. Retrieved October 27, 2026, from https://CRAN.R-project.org/package=mapfuser

This package has no citation file, so citation() returns this entry built from DESCRIPTION.

Cite the R Observatory

For a number measured here: a download total, a coverage figure, an archival date.

Format

APA

Balamuta, J. J. (2026). R Observatory: Metrics for mapfuser version 0.1.2 [Data set]. HJJB, LLC. Data release v2026-10-26. https://doi.org/10.5281/zenodo.21843040

From data release v2026-10-26, which the citation names so these numbers can be found later. More on citing and the projects behind them.

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