R Observatory: Metrics for mantis version 1.0.2

Balamuta, James Joseph

doi:10.5281/zenodo.21843040

mantis

1.0.2

Multiple Time Series Scanner

0packages depend

6.2Kdownloads / year

95.0%test coverage

13/13checks pass

Overview

About

Maintained by T. Phuong QuanFirst published 2025-07-285 releasesCRAN page ↗GitHub ↗

Generate interactive html reports that enable quick visual review of multiple related time series stored in a data frame. For static datasets, this can help to identify any temporal artefacts that may affect the validity of subsequent analyses. For live data feeds, regularly scheduled reports can help to pro-actively identify data feed problems or unexpected trends that may require action. The reports are self-contained and shareable without a web server.

Install

R (CRAN)pak (dev)Ubuntu (r2u)Fedora (COPR)openSUSE (OBS)

install.packages("mantis", repos = "https://cloud.r-project.org/")

Installs the current CRAN release. Prebuilt binaries on Windows and macOS.

if (!requireNamespace("pak", quietly = TRUE))
  install.packages("pak", repos = "https://cloud.r-project.org/")
pak::pak("ropensci/mantis")

Development version from ropensci/mantis. Installs pak first if it is not already available.

Release

# enable cranapt (r2u) if it is not already set up, then install
grep -rqs r2u.stat.illinois.edu /etc/apt/sources.list /etc/apt/sources.list.d/ \
  || curl -fsSL https://raw.githubusercontent.com/eddelbuettel/r2u/master/inst/scripts/add_cranapt_noble.sh | sudo bash
sudo apt install -y r-cran-mantis

Fast Ubuntu binaries via r2u (no compilation). The cranapt setup runs once and is skipped when it is already enabled.

bspm (used by r2u) also needs make: sudo apt install make

# enable the iucar/cran COPR if it is not already present, then install
ls /etc/yum.repos.d/*iucar*cran*.repo >/dev/null 2>&1 \
  || sudo dnf copr enable -y iucar/cran
sudo dnf install -y R-CRAN-mantis

RPMs from the iucar/cran COPR, rebuilt from CRAN.

For install.packages() integration in R, also: sudo dnf install R-CoprManager

# add the autoCRAN OBS repo (Tumbleweed) if it is missing, then install
zypper -q lr | grep -qi autoCRAN \
  || sudo zypper addrepo https://download.opensuse.org/repositories/devel:/languages:/R:/autoCRAN/openSUSE_Tumbleweed/devel:languages:R:autoCRAN.repo
sudo zypper install -y R-mantis

RPMs auto-built from CRAN on openSUSE OBS (Tumbleweed).

Health

CRAN checks

13OK

Slowest check: 3.7 min · r-oldrel-macos-x86_64

Code health

Yes

Tests · ratio 3.28

95.0%

Coverage · measured lines

100%

Documentation · exports

12

Dependencies · direct

Check history

OK2026-08-05
13 OK · 0 NOTE · 0 WARNING · 0 ERROR · 0 FAILURE
NOTE2026-08-01
12 OK · 1 NOTE · 0 WARNING · 0 ERROR · 0 FAILURE
OK2026-03-10
14 OK · 0 NOTE · 0 WARNING · 0 ERROR · 0 FAILURE

Documentation

READMEYes · 499 wordsVignettesYes · dynamicpkgdown siteNoNEWSYes · 100% structuredCode of conductNoContributing guideNo

Examples that run: 75%
Documented parameters: 97%
Return-value docs: 100%
References docs: 0%

Downloads

6.2K

CRAN downloads in the past year

Rank #8,468 · ~17/day · ~521/mo

Releases R versions

Daily download trend is not available in this view yet.

14830 days

1.1K90 days

6.2K1 year

Compare downloads with other packages →

Also on135 r2u17 autocran

Repository

GitHub ↗ ropensci/mantis

4Stars

1Forks

14Open issues

0Open PRs

8Releases

235Commits

4Contributors

License GPL-3.0 · 235 commits · Last activity 2026-07-30 · 0% stars, 30d

Stars over time

2025-06-26 · 12026-07-07 · 4

Repository practices

Upstream repositoryBeta

8 development-tooling and community-health practices detected across 6 families in the upstream repository

Checks run against github.com/ropensci/mantis on 2026-08-09.

Continuous integration (1)

GitHub Actions

Reproducibility and dev environment (2)

renvdata-raw/

Docs source (1)

README.Rmd

Research and citation (1)

codemeta.json

Show all practices

Lint, format, editor (2)

AirRStudio project

Coverage (1)

Codecov

How this is detected·Detection ruleset v1 (2026-07-18)

Dependencies

Declared dependencies

19 external dependencies (excludes base and recommended)

Depends (1)

R >= 4.1.0

Imports (12)

rmarkdown knitr reactable dplyr tidyr dygraphs xts ggplot2 scales purrr htmltools lubridate

LinkingTo (0)

none

Suggests (7)

covr testthat codemetar vdiffr shiny diffviewer withr

Enhances (0)

none

Dependency license breakdown →

Reverse dependencies

0direct

0indirect

Nothing depends on this yet.

Code & Tests

Datasets

People & History

People (5)

Maintainer (1)

T. Phuong Quan

Author, Maintainer

Authors (1)

T. Phuong Quan

Author, Maintainer

Copyright holders (1)

University of Oxford

Copyright holder

Funders (1)

National Institute for Health Research (NIHR)

Funder

Reviewers (2)

Rodrigo Pires

Reviewer · added in 1.0.0

Margaret Siple

Reviewer · added in 1.0.0

Listed in earlier versions (1)

T. Phuong

no longer listed · 0.4.2 to 1.0.2

Package Timeline

5 releases. Pick two to compare their code metrics. R releases are shown for context.

R
R 4.6.0 released · 2026-04-24
1.0.2Latest
2026-02-11 · current release · diff ↗
1.0.1
2026-01-13 · diff ↗
1.0.0
2025-10-27 · diff ↗
0.4.3
2025-08-01 · diff ↗
0.4.2
2025-07-28
R
R 4.5.0 released · 2025-04-11

Package metadata

First published: 2025-07-28
Total releases: 5 / 1 yrs
License: GPL (>= 3) OSI
Minimum R: ≥ 4.1.0
Bundled data: 15 KB / 2 files
Download size: 1.1 MB
Installed size: not tracked yet
With dependencies: not tracked yet

Cite

Cite this package

Run in R for the authors' preferred citation:

citation("mantis")

Format

Quan, T. P., National Institute for Health Research (NIHR), , Pires, R., Siple, M., & University of Oxford, . (2026). mantis: Multiple Time Series Scanner (Version 1.0.2) [Computer software]. https://doi.org/10.32614/CRAN.package.mantis

This is what citation() produces when a package has no citation file of its own. If it prints something else, use that.

Cite the R Observatory

For a number measured here: a download total, a coverage figure, an archival date.

Format

APA

Balamuta, J. J. (2026). R Observatory: Metrics for mantis version 1.0.2 [Data set]. HJJB, LLC. Data release v2026-08-15. https://doi.org/10.5281/zenodo.21843040

From data release v2026-08-15, which the citation names so these numbers can be found later. More on citing and the projects behind them.

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