R Observatory: Metrics for kuenm2 version 0.1.3

Balamuta, James Joseph

doi:10.5281/zenodo.21843040

kuenm2

0.1.3Package record

Detailed Development of Ecological Niche Models

0packages depend

3.5Kdownloads / year

0.0%test coverage

13/13flavors OK

Overview

About

Maintained by Weverton C. F. TrindadeCRAN page ↗GitHub ↗Website ↗Issues ↗

A new set of tools to help with the development of detailed ecological niche models using multiple algorithms. Pre-modeling analyses and explorations can be done to prepare data. Model calibration (model selection) can be done by creating and testing models with several parameter combinations. Handy options for producing final models with transfers are included. Other tools to assess extrapolation risks and variability in model transfers are also available. Methodological and theoretical basis for the methods implemented here can be found in: Peterson et al. (2011) https://www.degruyter.com/princetonup/view/title/506966, Radosavljevic and Anderson (2014) doi:10.1111/jbi.12227, Peterson et al. (2018) doi:10.1111/nyas.13873, Cobos et al. (2019) doi:10.7717/peerj.6281, Alkishe et al. (2020) doi:10.1016/j.pecon.2020.03.002, Machado-Stredel et al. (2021) doi:10.21425/F5FBG48814, Arias-Giraldo and Cobos (2024) doi:10.17161/bi.v18i.21742, Cobos et al. (2024) doi:10.17161/bi.v18i.21742.

Changes in 0.1.3

In bivariate_response(), store and restore graphical parameters only when plotting area is modified.
In response_curves(), omit graphical parameter storing and resetting to allow plotting in multipanel figures.
In projection_changes(), create data.frame to set levels representing changes outside of the loop. This ensures it works correctly even when by_gcm is set to FALSE.

From NEWS.md in the release

Install

R (CRAN)pak (dev)Ubuntu (r2u)Fedora (COPR)openSUSE (OBS)

install.packages("kuenm2", repos = "https://cloud.r-project.org/")

Installs the current CRAN release. Prebuilt binaries on Windows and macOS.

if (!requireNamespace("pak", quietly = TRUE))
  install.packages("pak", repos = "https://cloud.r-project.org/")
pak::pak("marlonecobos/kuenm2")

Development version from marlonecobos/kuenm2. Installs pak first if it is not already available.

Release

# enable cranapt (r2u) if it is not already set up, then install
grep -rqs r2u.stat.illinois.edu /etc/apt/sources.list /etc/apt/sources.list.d/ \
  || curl -fsSL https://raw.githubusercontent.com/eddelbuettel/r2u/master/inst/scripts/add_cranapt_noble.sh | sudo bash
sudo apt install -y r-cran-kuenm2

Fast Ubuntu binaries via r2u (no compilation). The cranapt setup runs once and is skipped when it is already enabled. We list this channel from recorded r2u download activity rather than from a live index of the repository, so treat it as last known rather than guaranteed.

bspm (used by r2u) also needs make: sudo apt install make

# enable the iucar/cran COPR if it is not already present, then install
ls /etc/yum.repos.d/*iucar*cran*.repo >/dev/null 2>&1 \
  || sudo dnf copr enable -y iucar/cran
sudo dnf install -y R-CRAN-kuenm2

RPMs from the iucar/cran COPR, rebuilt from CRAN.

For install.packages() integration in R, also: sudo dnf install R-CoprManager

# add the autoCRAN OBS repo (Tumbleweed) if it is missing, then install
zypper -q lr | grep -qi autoCRAN \
  || sudo zypper addrepo https://download.opensuse.org/repositories/devel:/languages:/R:/autoCRAN/openSUSE_Tumbleweed/devel:languages:R:autoCRAN.repo
sudo zypper install -y R-kuenm2

RPMs auto-built from CRAN on openSUSE OBS (Tumbleweed). We list this channel from recorded autoCRAN download activity rather than from a live index of the repository, so treat it as last known rather than guaranteed.

Health

CRAN checks

13OK

CRAN check page ↗

Slowest check: 12.7 min · r-oldrel-macos-x86_64

Status changes

OK13 OK2026-08-05
NOTE12 OK, 1 NOTE2026-08-01
OK7 OK2026-03-30

Advisories

none known

How this is measured·How advisories are found

Documentation

In release 0.1.3

READMEYes · 1,426 wordsVignettesYes · 8 · dynamicNEWSYes · 100% structured · mentions 0.1.3Citation fileNoWebsiteYes · pkgdown

Help pages: 78includes a package overview page
Examples that run: 100%56 run in a plain check
Exported functions with examples: 90%
Documented parameters: 99%
Return-value docs: 100%
Help pages citing references: 6%

Vignettes (8)

How these are measured

Downloads

3.5K

CRAN downloads in the past year

Rank #6,101 · ~10/day · ~295/mo

Releases R versions

Daily download trend is not available in this view yet.

50930 days

1.4K90 days

3.5K1 year

Compare downloads with other packages →

Also on62 r2u4 autocran

How downloads are counted

Repository

marlonecobos/kuenm2 ↗Account: marlonecobos

12Stars

4Forks

0Open issues

0Open PRs

2Releases

737Commits

6Commit identities

737 commits · Last activity 2026-10-01 · Default branch at 0.1.4, ahead of CRAN 0.1.3 (checked 2026-10-21)

Responsiveness

How these are sampled

PRs merged (all time): 100%
Median days to close, 50 most recently updated closed issues: 82
Median days to close, 50 most recently updated closed PRs: 0

Forks over time

2026-07-14 · 32026-08-07 · 4

How these are measured

PracticesBeta

9 development-tooling and community-health practices detected across 4 families in the upstream repository

Checks run against github.com/marlonecobos/kuenm2 on 2026-10-21.

Continuous integration (2)

GitHub ActionsR CMD check workflow

The R CMD check workflow runs on Linux, macOS and Windows, and on R-devel

Docs source (4)

README.Rmdpkgdown

GitHub Pages site last deployed 2026-10-18 · The repository has a site deploy workflow

pkgdown site last built 2026-10-18

CRAN release process (2)

cran-comments.mdCRAN-SUBMISSION

Lint, format, editor (1)

RStudio project

How this is detected·Detection ruleset v4 (2026-10-20)

Dependencies

Declared dependencies

10 external dependencies (excludes base and recommended)

Installing kuenm2 adds 16 packages (9 with compiled code, 14 MB of source tarballs). Heaviest: enmpa 2.7 MB, glmnet 2.7 MB, Rcpp 1.8 MB.

Depends (1)

R >= 3.5

Imports (13)

doSNOW enmpa foreach fpROC glmnetgrDevicesgraphicsmgcvmop (>= 0.1.3)parallelstatsterrautils

LinkingTo (0)

none

Suggests (3)

knitr rmarkdown spelling

Enhances (0)

none

Dependency license breakdown →

Reverse dependencies

0direct

0indirect

Nothing depends on this yet.

How these are counted

Code & Tests

Datasets

People & History

People (5)

Weverton C. F. Trindade

Author, Maintainer since 0.1.2 (2026)

Luis F. Arias-Giraldo

Author

Marlon E. Cobos

Author

Luis Osorio-Olvera

Author

A. Townsend Peterson

Author

Releases (2)

Pick two releases to compare their code metrics.

R
R 4.6.0 released · 2026-04-24
0.1.3Latest
record
2026-04-20 · current release · diff ↗
0.1.2
record
2026-03-29
R
R 4.5.0 released · 2025-04-11

Package metadata

First published: 2026-03-29
Total releases: 2 / 1 yrs
License: GPL (>= 3) OSI
Minimum R: ≥ 3.5
Bundled data: 710 KB / 16 files
Download size: 2.7 MB

Cite

Cite this package

Run in R for the authors' preferred citation:

citation("kuenm2")

Format

Trindade, W. C. F., Arias-Giraldo, L. F., Cobos, M. E., Osorio-Olvera, L., & Peterson, A. T. (2026). kuenm2: Detailed Development of Ecological Niche Models (Version 0.1.3) [Computer software]. https://doi.org/10.32614/CRAN.package.kuenm2

This package has no citation file, so citation() returns this entry built from DESCRIPTION.

Cite the R Observatory

For a number measured here: a download total, a coverage figure, an archival date.

Format

APA

Balamuta, J. J. (2026). R Observatory: Metrics for kuenm2 version 0.1.3 [Data set]. HJJB, LLC. Data release v2026-10-23. https://doi.org/10.5281/zenodo.21843040

From data release v2026-10-23, which the citation names so these numbers can be found later. More on citing and the projects behind them.

Report a problem with this page →