R Observatory: Metrics for iClusterVB version 0.1.4

Balamuta, James Joseph

doi:10.5281/zenodo.21843040

iClusterVB

0.1.4Package record

Fast Integrative Clustering and Feature Selection for High Dimensional Data

0packages depend

2.5Kdownloads / year

–test coverage

13/13flavors OK

Overview

About

Maintained by Abdalkarim AlnajjarCRAN page ↗GitHub ↗Issues ↗

A variational Bayesian approach for fast integrative clustering and feature selection, facilitating the analysis of multi-view, mixed type, high-dimensional datasets with applications in fields like cancer research, genomics, and more.

Install

R (CRAN)pak (dev)Ubuntu (r2u)Fedora (COPR)openSUSE (OBS)

install.packages("iClusterVB", repos = "https://cloud.r-project.org/")

Installs the current CRAN release. Prebuilt binaries on Windows and macOS.

if (!requireNamespace("pak", quietly = TRUE))
  install.packages("pak", repos = "https://cloud.r-project.org/")
pak::pak("AbdalkarimA/iClusterVB")

Development version from AbdalkarimA/iClusterVB. Installs pak first if it is not already available.

Release

# enable cranapt (r2u) if it is not already set up, then install
grep -rqs r2u.stat.illinois.edu /etc/apt/sources.list /etc/apt/sources.list.d/ \
  || curl -fsSL https://raw.githubusercontent.com/eddelbuettel/r2u/master/inst/scripts/add_cranapt_noble.sh | sudo bash
sudo apt install -y r-cran-iclustervb

Fast Ubuntu binaries via r2u (no compilation). The cranapt setup runs once and is skipped when it is already enabled. We list this channel from recorded r2u download activity rather than from a live index of the repository, so treat it as last known rather than guaranteed.

bspm (used by r2u) also needs make: sudo apt install make

# enable the iucar/cran COPR if it is not already present, then install
ls /etc/yum.repos.d/*iucar*cran*.repo >/dev/null 2>&1 \
  || sudo dnf copr enable -y iucar/cran
sudo dnf install -y R-CRAN-iClusterVB

RPMs from the iucar/cran COPR, rebuilt from CRAN.

For install.packages() integration in R, also: sudo dnf install R-CoprManager

# add the autoCRAN OBS repo (Tumbleweed) if it is missing, then install
zypper -q lr | grep -qi autoCRAN \
  || sudo zypper addrepo https://download.opensuse.org/repositories/devel:/languages:/R:/autoCRAN/openSUSE_Tumbleweed/devel:languages:R:autoCRAN.repo
sudo zypper install -y R-iClusterVB

RPMs auto-built from CRAN on openSUSE OBS (Tumbleweed). We list this channel from recorded autoCRAN download activity rather than from a live index of the repository, so treat it as last known rather than guaranteed.

Health

CRAN checks

13OK

CRAN check page ↗

Slowest check: 5.2 min · r-devel-windows-x86_64

Status changes

OK13 OK2026-08-05
NOTE12 OK, 1 NOTE2026-08-01
OK13 OK2026-06-09
WARNING12 OK, 1 WARNING2026-06-08
OK13 OK2026-05-02

Show 3 earlier changesHide 3 earlier changes

NOTE12 OK, 2 NOTE2026-04-22
ERROR11 OK, 2 NOTE, 1 ERROR2026-04-18
NOTE12 OK, 2 NOTE2026-03-10

Advisories

none known

How this is measured·How advisories are found

Documentation

In release 0.1.4

READMEYes · 913 wordsVignettesYes · 1 · dynamicNEWSNoCitation fileNoWebsitenot declared in DESCRIPTION

Help pages: 7
Examples that run: 100%5 run in a plain check
Exported functions with examples: 100%
Documented parameters: 100%
Return-value docs: 100%
Help pages citing references: 14%

Vignettes (1)

Introduction to iClusterVB HTML

How these are measured

Downloads

2.5K

CRAN downloads in the past year

Rank #14,883 · ~7/day · ~208/mo

Releases R versions

Daily download trend is not available in this view yet.

26630 days

80590 days

2.5K1 year

Compare downloads with other packages →

Also on369 r2u9 autocran

How downloads are counted

Repository

abdalkarima/iclustervb ↗Account: AbdalkarimA

1Stars

0Forks

0Open issues

0Open PRs

0Releases

105Commits

1Commit identities

105 commits · Last activity 2024-12-07

Responsiveness

not measured

Stars over time

2024-09-19 · 12026-07-07 · 1

How these are measured

PracticesBeta

4 development-tooling and community-health practices detected across 3 families in the upstream repository

Checks run against github.com/abdalkarima/iclustervb on 2026-10-18.

Continuous integration (2)

GitHub ActionsR CMD check workflow

The R CMD check workflow runs on Linux, macOS and Windows, and on R-devel

Docs source (1)

README.Rmd

Lint, format, editor (1)

RStudio project

How this is detected·Detection ruleset v3 (2026-09-26)

Dependencies

Declared dependencies

15 external dependencies (excludes base and recommended)

Installing iClusterVB adds 64 packages (36 with compiled code, 51 MB of source tarballs). Heaviest: ggplot2 6.0 MB, bslib 5.6 MB, promises 3.1 MB.

Depends (1)

R >= 4.0.0

Imports (15)

clusterclustMixType cowplot ggplot2graphicsgrDevicesmclust MCMCpack mvtnorm pheatmap poLCA RcppstatsutilsVarSelLCM

LinkingTo (2)

Rcpp RcppArmadillo

Suggests (4)

knitr rmarkdownsurvivalsurvminer

Enhances (0)

none

Dependency license breakdown →

Reverse dependencies

0direct

0indirect

Nothing depends on this yet.

How these are counted

Code & Tests

Datasets

People & History

People (2)

Abdalkarim Alnajjar

Zihang Lu

Author

Releases (4)

Pick two releases to compare their code metrics.

R
R 4.6.0 released · 2026-04-24
R
R 4.5.0 released · 2025-04-11
unarchivedReturned to CRAN
2024-12-09
0.1.4Latest
record
2024-12-09 · current release · diff ↗
archivedRemoved from CRAN
2024-12-05
issues were not corrected even on re-submission Use-after-free errors yet again
unarchivedReturned to CRAN
2024-12-04
0.1.3
record
2024-12-04 · diff ↗
archivedRemoved from CRAN
2024-11-14
issues were not corrected in time
unarchivedReturned to CRAN
2024-08-20
0.1.2
record
2024-08-20 · diff ↗
archivedRemoved from CRAN
2024-08-19
issues were not corrected in time
0.1.1
record
2024-07-30
R
R 4.4.0 released · 2024-04-24

Package metadata

First published: 2024-07-30
Total releases: 4 / 2 yrs
License: MIT + file LICENSE OSI
Minimum R: ≥ 4.0.0
Bundled data: 2.0 MB / 2 files
Download size: 2.4 MB

Cite

Cite this package

Run in R for the authors' preferred citation:

citation("iClusterVB")

Format

Alnajjar, A., & Lu, Z. (2024). iClusterVB: Fast Integrative Clustering and Feature Selection for High Dimensional Data (Version 0.1.4) [Computer software]. https://doi.org/10.32614/CRAN.package.iClusterVB

This package has no citation file, so citation() returns this entry built from DESCRIPTION.

Cite the R Observatory

For a number measured here: a download total, a coverage figure, an archival date.

Format

APA

Balamuta, J. J. (2026). R Observatory: Metrics for iClusterVB version 0.1.4 [Data set]. HJJB, LLC. Data release v2026-10-21. https://doi.org/10.5281/zenodo.21843040

From data release v2026-10-21, which the citation names so these numbers can be found later. More on citing and the projects behind them.

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