R Observatory: Metrics for hubEnsembles version 1.0.0

Balamuta, James Joseph

doi:10.5281/zenodo.21843040

hubEnsembles

1.0.0

Ensemble Methods for Combining Hub Model Outputs

1packages depend

6.6Kdownloads / year

96.9%test coverage

13/13checks pass

Overview

About

Maintained by Li ShandrossFirst published 2024-09-263 releasesCRAN page ↗GitHub ↗

Functions for combining model outputs (e.g. predictions or estimates) from multiple models into an aggregated ensemble model output.

Install

R (CRAN)pak (dev)Ubuntu (r2u)Fedora (COPR)openSUSE (OBS)

install.packages("hubEnsembles", repos = "https://cloud.r-project.org/")

Installs the current CRAN release. Prebuilt binaries on Windows and macOS.

if (!requireNamespace("pak", quietly = TRUE))
  install.packages("pak", repos = "https://cloud.r-project.org/")
pak::pak("hubverse-org/hubEnsembles")

Development version from hubverse-org/hubEnsembles. Installs pak first if it is not already available.

Release

# enable cranapt (r2u) if it is not already set up, then install
grep -rqs r2u.stat.illinois.edu /etc/apt/sources.list /etc/apt/sources.list.d/ \
  || curl -fsSL https://raw.githubusercontent.com/eddelbuettel/r2u/master/inst/scripts/add_cranapt_noble.sh | sudo bash
sudo apt install -y r-cran-hubensembles

Fast Ubuntu binaries via r2u (no compilation). The cranapt setup runs once and is skipped when it is already enabled.

bspm (used by r2u) also needs make: sudo apt install make

# enable the iucar/cran COPR if it is not already present, then install
ls /etc/yum.repos.d/*iucar*cran*.repo >/dev/null 2>&1 \
  || sudo dnf copr enable -y iucar/cran
sudo dnf install -y R-CRAN-hubEnsembles

RPMs from the iucar/cran COPR, rebuilt from CRAN.

For install.packages() integration in R, also: sudo dnf install R-CoprManager

# add the autoCRAN OBS repo (Tumbleweed) if it is missing, then install
zypper -q lr | grep -qi autoCRAN \
  || sudo zypper addrepo https://download.opensuse.org/repositories/devel:/languages:/R:/autoCRAN/openSUSE_Tumbleweed/devel:languages:R:autoCRAN.repo
sudo zypper install -y R-hubEnsembles

RPMs auto-built from CRAN on openSUSE OBS (Tumbleweed).

Health

CRAN checks

13OK

Slowest check: 1.2 min · r-oldrel-windows-x86_64

Code health

Yes

Tests · ratio 1.26

96.9%

Coverage · measured lines

100%

Documentation · exports

11

Dependencies · direct

Check history

OK2026-08-05
13 OK · 0 NOTE · 0 WARNING · 0 ERROR · 0 FAILURE
NOTE2026-08-01
12 OK · 1 NOTE · 0 WARNING · 0 ERROR · 0 FAILURE
OK2026-04-25
12 OK · 0 NOTE · 0 WARNING · 0 ERROR · 0 FAILURE
NOTE2026-03-10
11 OK · 3 NOTE · 0 WARNING · 0 ERROR · 0 FAILURE

Documentation

READMEYes · 177 wordsVignettesNopkgdown siteNoNEWSYes · 100% structuredCode of conductNoContributing guideNo

Examples that run: 100%
Documented parameters: 100%
Return-value docs: 100%
References docs: 0%

Downloads

6.6K

CRAN downloads in the past year

Rank #7,455 · ~18/day · ~546/mo

Releases R versions

Daily download trend is not available in this view yet.

22430 days

1.1K90 days

6.6K1 year

Compare downloads with other packages →

Also on99 r2u22 autocran

Repository

GitHub ↗ hubverse-org/hubensembles

8Stars

1Forks

8Open issues

4Open PRs

5Releases

490Commits

12Contributors

hubverser-package

490 commits · Last activity 2026-08-17 · 0% stars, 30d

Stars over time

2024-09-04 · 62026-07-07 · 8

Repository practices

Upstream repositoryBeta

10 development-tooling and community-health practices detected across 7 families in the upstream repository

Checks run against github.com/hubverse-org/hubensembles on 2026-08-16.

Continuous integration (1)

GitHub Actions

Reproducibility and dev environment (1)

data-raw/

CRAN release process (1)

cran-comments.md

Docs source (1)

README.Rmd

Show all practices

Automation and maintenance (1)

Dependabot

Lint, format, editor (4)

lintrAirVS CodeRStudio project

Governance and community (1)

CODEOWNERS

How this is detected·Detection ruleset v1 (2026-07-18)

Dependencies

Declared dependencies

17 external dependencies (excludes base and recommended)

Depends (1)

R >= 4.1

Imports (11)

cli distfromq dplyr hubUtils lifecycle matrixStats purrr rlangstatstidyr tidyselect

LinkingTo (0)

none

Suggests (7)

cowplot ggplot2 hubExamples hubVis knitr rmarkdown testthat

Enhances (0)

none

Dependency license breakdown →

Reverse dependencies

1direct

0indirect

modelimportance

Code & Tests

Datasets

People & History

People (7)

Maintainer (1)

Li Shandross

Author, Maintainer

Authors (3)

Li Shandross

Author, Maintainer

Emily Howerton

Author

Evan L Ray

Author

Contributors (3)

Zhian N. Kamvar

Contributor

Anna Krystalli

Contributor

Nicholas G. Reich

Contributor

Copyright holders (1)

Consortium of Infectious Disease Modeling Hubs

Copyright holder

Package Timeline

3 releases. Pick two to compare their code metrics. R releases are shown for context.

R
R 4.6.0 released · 2026-04-24
1.0.0Latest
2025-05-23 · current release · diff ↗
R
R 4.5.0 released · 2025-04-11
0.1.9
2024-10-02 · diff ↗
0.1.8
2024-09-26
R
R 4.4.0 released · 2024-04-24

Package metadata

First published: 2024-09-26
Total releases: 3 / 2 yrs
License: MIT + file LICENSE OSI
Additional repositories: hubverse-org.r-universe.dev
Minimum R: ≥ 4.1
Bundled data: 2.3 KB / 4 files
Download size: 72 KB
Installed size: not tracked yet
With dependencies: not tracked yet

Cite

Cite this package

Run in R for the authors' preferred citation:

citation("hubEnsembles")

Format

Shandross, L., Consortium of Infectious Disease Modeling Hubs, Howerton, E., Kamvar, Z. N., Krystalli, A., Ray, E. L., & Reich, N. G. (2025). hubEnsembles: Ensemble Methods for Combining Hub Model Outputs (Version 1.0.0) [Computer software]. https://doi.org/10.32614/CRAN.package.hubEnsembles

This is what citation() produces when a package has no citation file of its own. If it prints something else, use that.

Cite the R Observatory

For a number measured here: a download total, a coverage figure, an archival date.

Format

APA

Balamuta, J. J. (2026). R Observatory: Metrics for hubEnsembles version 1.0.0 [Data set]. HJJB, LLC. Data release v2026-08-22. https://doi.org/10.5281/zenodo.21843040

From data release v2026-08-22, which the citation names so these numbers can be found later. More on citing and the projects behind them.

Report a problem with this page →