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hmmTMB

Fit Hidden Markov Models using Template Model Builder

v1.1.2 · Nov 5, 2025 · GPL-3

Description

Fitting hidden Markov models using automatic differentiation and Laplace approximation, allowing for fast inference and flexible covariate effects (including random effects and smoothing splines) on model parameters. The package is described by Michelot (2025) <doi:10.18637/jss.v114.i05>.

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CRAN Check Status

3 NOTE
11 OK
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Flavor Status
r-devel-linux-x86_64-debian-clang OK
r-devel-linux-x86_64-debian-gcc OK
r-devel-linux-x86_64-fedora-clang OK
r-devel-linux-x86_64-fedora-gcc OK
r-devel-macos-arm64 OK
r-devel-windows-x86_64 OK
r-oldrel-macos-arm64 NOTE
r-oldrel-macos-x86_64 NOTE
r-oldrel-windows-x86_64 NOTE
r-patched-linux-x86_64 OK
r-release-linux-x86_64 OK
r-release-macos-arm64 OK
r-release-macos-x86_64 OK
r-release-windows-x86_64 OK
Check details (3 non-OK)
NOTE r-oldrel-macos-arm64

installed package size

installed size is 101.9Mb
  sub-directories of 1Mb or more:
    libs  100.3Mb
NOTE r-oldrel-macos-x86_64

installed package size

installed size is 102.6Mb
  sub-directories of 1Mb or more:
    libs  101.0Mb
NOTE r-oldrel-windows-x86_64

installed package size

installed size is 15.2Mb
  sub-directories of 1Mb or more:
    libs  13.9Mb

Check History

NOTE 11 OK · 3 NOTE · 0 WARNING · 0 ERROR · 0 FAILURE Mar 10, 2026
NOTE r-oldrel-macos-arm64

installed package size

installed size is 101.9Mb
  sub-directories of 1Mb or more:
    libs  100.3Mb
NOTE r-oldrel-macos-x86_64

installed package size

installed size is 102.6Mb
  sub-directories of 1Mb or more:
    libs  101.0Mb
NOTE r-oldrel-windows-x86_64

installed package size

installed size is 15.2Mb
  sub-directories of 1Mb or more:
    libs  13.9Mb

Dependency Network

Dependencies Reverse dependencies R6 mgcv TMB ggplot2 Matrix stringr MASS tmbstan hmmTMB

Version History

new 1.1.2 Mar 10, 2026
updated 1.1.2 ← 1.1.1 diff Nov 4, 2025
updated 1.1.1 ← 1.1.0 diff Sep 10, 2025
updated 1.1.0 ← 1.0.2 diff Jun 23, 2025
updated 1.0.2 ← 1.0.1 diff Oct 23, 2023
updated 1.0.1 ← 1.0.0 diff Jan 12, 2023
new 1.0.0 Jan 10, 2023