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MSwM

Fitting Markov Switching Models

v1.5 · Jun 6, 2021 · GPL (>= 2.0)
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Description

Estimation, inference and diagnostics for Univariate Autoregressive Markov Switching Models for Linear and Generalized Models. Distributions for the series include gaussian, Poisson, binomial and gamma cases. The EM algorithm is used for estimation (see Perlin (2012) <doi:10.2139/ssrn.1714016>).

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r-devel-linux-x86_64-debian-clang NOTE
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r-devel-linux-x86_64-fedora-clang NOTE
r-devel-linux-x86_64-fedora-gcc NOTE
r-devel-macos-arm64 NOTE
r-devel-windows-x86_64 NOTE
r-oldrel-macos-arm64 NOTE
r-oldrel-macos-x86_64 NOTE
r-oldrel-windows-x86_64 NOTE
r-patched-linux-x86_64 NOTE
r-release-linux-x86_64 NOTE
r-release-macos-arm64 NOTE
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r-release-windows-x86_64 NOTE
Check details (16 non-OK)
NOTE r-devel-linux-x86_64-debian-clang

CRAN incoming feasibility

Maintainer: ‘Josep A. Sanchez-Espigares <josep.a.sanchez@upc.edu>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: c(person(given = c("Josep", "A."),
                      family = "Sanchez-Espigares",
                      role = c("aut", "cre"),
                      email = "josep.a.sanchez@upc.edu"),
               person(given = "Alberto",
                      family = "Lopez-Moreno",
                      role = "aut"))
as necessary.
NOTE r-devel-linux-x86_64-debian-clang

Rd files

checkRd: (-1) msmFit.Rd:30: Lost braces
    30 |         -\code{trace}{: A logical value. If it is TRUE, tracing information on the progress of the optimization is produced.}
       |                      ^
checkRd: (-1) msmFit.Rd:32: Lost braces
    32 |         -\code{maxiter}{: The maximum number of iterations in the EM method. Default is 100.}
       |                        ^
checkRd: (-1) msmFit.Rd:34: Lost braces
    34 |         -\code{tol}{: Tolerance. The algorithm stops if it is unable to reduce the value by a factor of \code{tol} at a step. Default is 1e-8.}
       |                    ^
checkRd: (-1) msmFit.Rd:36: Lost braces
    36 |         -\code{maxiterOuter}{: The number of short runs of the EM method to stablish the initial values. Default is 5}
       |                             ^
checkRd: (-1) msmFit.Rd:38: Lost braces
    38 |         -\code{maxiterInner}{: The number of iterations in the EM method in each short run to stablish the initial values. Default is 10}
...[truncated]...
     -\code{parallelization}{: A logical value. Whether the process is done by using parallelization or not. Default is TRUE.}
       |                                ^
checkRd: (-1) plotDiag.Rd:33: Lost braces
    33 | - \code{1}{: represents the plot of residuals against fitted values. }
       |           ^
checkRd: (-1) plotDiag.Rd:35: Lost braces
    35 | - \code{2}{: represents the Normal Q-Q plot. }
       |           ^
checkRd: (-1) plotDiag.Rd:37: Lost braces
    37 | - \code{3}{: represents the ACF/PACF of residuals and ACF/PACF of square residuals. }
       |           ^
checkRd: (-1) plotProb.Rd:29: Lost braces
    29 | -\code{1}{: represents the plots that contains, for each regime, its smoothed and filtered probabilities.}.
       |          ^
checkRd: (-1) plotProb.Rd:31: Lost braces
    31 | -\code{2:(number of regimes +1)}{: represents plot of the regime minus one with the response variable against the smoothed probabilities.}
       |                                 ^
NOTE r-devel-linux-x86_64-debian-gcc

CRAN incoming feasibility

Maintainer: ‘Josep A. Sanchez-Espigares <josep.a.sanchez@upc.edu>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: c(person(given = c("Josep", "A."),
                      family = "Sanchez-Espigares",
                      role = c("aut", "cre"),
                      email = "josep.a.sanchez@upc.edu"),
               person(given = "Alberto",
                      family = "Lopez-Moreno",
                      role = "aut"))
as necessary.
NOTE r-devel-linux-x86_64-debian-gcc

Rd files

checkRd: (-1) msmFit.Rd:30: Lost braces
    30 |         -\code{trace}{: A logical value. If it is TRUE, tracing information on the progress of the optimization is produced.}
       |                      ^
checkRd: (-1) msmFit.Rd:32: Lost braces
    32 |         -\code{maxiter}{: The maximum number of iterations in the EM method. Default is 100.}
       |                        ^
checkRd: (-1) msmFit.Rd:34: Lost braces
    34 |         -\code{tol}{: Tolerance. The algorithm stops if it is unable to reduce the value by a factor of \code{tol} at a step. Default is 1e-8.}
       |                    ^
checkRd: (-1) msmFit.Rd:36: Lost braces
    36 |         -\code{maxiterOuter}{: The number of short runs of the EM method to stablish the initial values. Default is 5}
       |                             ^
checkRd: (-1) msmFit.Rd:38: Lost braces
    38 |         -\code{maxiterInner}{: The number of iterations in the EM method in each short run to stablish the initial values. Default is 10}
...[truncated]...
     -\code{parallelization}{: A logical value. Whether the process is done by using parallelization or not. Default is TRUE.}
       |                                ^
checkRd: (-1) plotDiag.Rd:33: Lost braces
    33 | - \code{1}{: represents the plot of residuals against fitted values. }
       |           ^
checkRd: (-1) plotDiag.Rd:35: Lost braces
    35 | - \code{2}{: represents the Normal Q-Q plot. }
       |           ^
checkRd: (-1) plotDiag.Rd:37: Lost braces
    37 | - \code{3}{: represents the ACF/PACF of residuals and ACF/PACF of square residuals. }
       |           ^
checkRd: (-1) plotProb.Rd:29: Lost braces
    29 | -\code{1}{: represents the plots that contains, for each regime, its smoothed and filtered probabilities.}.
       |          ^
checkRd: (-1) plotProb.Rd:31: Lost braces
    31 | -\code{2:(number of regimes +1)}{: represents plot of the regime minus one with the response variable against the smoothed probabilities.}
       |                                 ^
NOTE r-devel-linux-x86_64-fedora-clang

Rd files

checkRd: (-1) msmFit.Rd:30: Lost braces
    30 |         -\code{trace}{: A logical value. If it is TRUE, tracing information on the progress of the optimization is produced.}
       |                      ^
checkRd: (-1) msmFit.Rd:32: Lost braces
    32 |         -\code{maxiter}{: The maximum number of iterations in the EM method. Default is 100.}
       |                        ^
checkRd: (-1) msmFit.Rd:34: Lost braces
    34 |         -\code{tol}{: Tolerance. The algorithm stops if it is unable to reduce the value by a factor of \code{tol} at a step. Default is 1e-8.}
       |                    ^
checkRd: (-1) msmFit.Rd:36: Lost braces
    36 |         -\code{maxiterOuter}{: The number of short runs of the EM method to stablish the initial values. Default is 5}
       |                             ^
checkRd: (-1) msmFit.Rd:38: Lost braces
    38 |         -\code{maxiterInner}{: The number of iterations in the EM method in each short run to stablish the initial values. Default is 10}
...[truncated]...
     -\code{parallelization}{: A logical value. Whether the process is done by using parallelization or not. Default is TRUE.}
       |                                ^
checkRd: (-1) plotDiag.Rd:33: Lost braces
    33 | - \code{1}{: represents the plot of residuals against fitted values. }
       |           ^
checkRd: (-1) plotDiag.Rd:35: Lost braces
    35 | - \code{2}{: represents the Normal Q-Q plot. }
       |           ^
checkRd: (-1) plotDiag.Rd:37: Lost braces
    37 | - \code{3}{: represents the ACF/PACF of residuals and ACF/PACF of square residuals. }
       |           ^
checkRd: (-1) plotProb.Rd:29: Lost braces
    29 | -\code{1}{: represents the plots that contains, for each regime, its smoothed and filtered probabilities.}.
       |          ^
checkRd: (-1) plotProb.Rd:31: Lost braces
    31 | -\code{2:(number of regimes +1)}{: represents plot of the regime minus one with the response variable against the smoothed probabilities.}
       |                                 ^
NOTE r-devel-linux-x86_64-fedora-gcc

Rd files

checkRd: (-1) msmFit.Rd:30: Lost braces
    30 |         -\code{trace}{: A logical value. If it is TRUE, tracing information on the progress of the optimization is produced.}
       |                      ^
checkRd: (-1) msmFit.Rd:32: Lost braces
    32 |         -\code{maxiter}{: The maximum number of iterations in the EM method. Default is 100.}
       |                        ^
checkRd: (-1) msmFit.Rd:34: Lost braces
    34 |         -\code{tol}{: Tolerance. The algorithm stops if it is unable to reduce the value by a factor of \code{tol} at a step. Default is 1e-8.}
       |                    ^
checkRd: (-1) msmFit.Rd:36: Lost braces
    36 |         -\code{maxiterOuter}{: The number of short runs of the EM method to stablish the initial values. Default is 5}
       |                             ^
checkRd: (-1) msmFit.Rd:38: Lost braces
    38 |         -\code{maxiterInner}{: The number of iterations in the EM method in each short run to stablish the initial values. Default is 10}
...[truncated]...
     -\code{parallelization}{: A logical value. Whether the process is done by using parallelization or not. Default is TRUE.}
       |                                ^
checkRd: (-1) plotDiag.Rd:33: Lost braces
    33 | - \code{1}{: represents the plot of residuals against fitted values. }
       |           ^
checkRd: (-1) plotDiag.Rd:35: Lost braces
    35 | - \code{2}{: represents the Normal Q-Q plot. }
       |           ^
checkRd: (-1) plotDiag.Rd:37: Lost braces
    37 | - \code{3}{: represents the ACF/PACF of residuals and ACF/PACF of square residuals. }
       |           ^
checkRd: (-1) plotProb.Rd:29: Lost braces
    29 | -\code{1}{: represents the plots that contains, for each regime, its smoothed and filtered probabilities.}.
       |          ^
checkRd: (-1) plotProb.Rd:31: Lost braces
    31 | -\code{2:(number of regimes +1)}{: represents plot of the regime minus one with the response variable against the smoothed probabilities.}
       |                                 ^
NOTE r-devel-macos-arm64

Rd files

checkRd: (-1) msmFit.Rd:30: Lost braces
    30 |         -\code{trace}{: A logical value. If it is TRUE, tracing information on the progress of the optimization is produced.}
       |                      ^
checkRd: (-1) msmFit.Rd:32: Lost braces
    32 |         -\code{maxiter}{: The maximum number of iterations in the EM method. Default is 100.}
       |                        ^
checkRd: (-1) msmFit.Rd:34: Lost braces
    34 |         -\code{tol}{: Tolerance. The algorithm stops if it is unable to reduce the value by a factor of \code{tol} at a step. Default is 1e-8.}
       |                    ^
checkRd: (-1) msmFit.Rd:36: Lost braces
    36 |         -\code{maxiterOuter}{: The number of short runs of the EM method to stablish the initial values. Default is 5}
       |                             ^
checkRd: (-1) msmFit.Rd:38: Lost braces
    38 |         -\code{maxiterInner}{: The number of iterations in the EM method in each short run to stablish the initial values. Default is 10}
...[truncated]...
     -\code{parallelization}{: A logical value. Whether the process is done by using parallelization or not. Default is TRUE.}
       |                                ^
checkRd: (-1) plotDiag.Rd:33: Lost braces
    33 | - \code{1}{: represents the plot of residuals against fitted values. }
       |           ^
checkRd: (-1) plotDiag.Rd:35: Lost braces
    35 | - \code{2}{: represents the Normal Q-Q plot. }
       |           ^
checkRd: (-1) plotDiag.Rd:37: Lost braces
    37 | - \code{3}{: represents the ACF/PACF of residuals and ACF/PACF of square residuals. }
       |           ^
checkRd: (-1) plotProb.Rd:29: Lost braces
    29 | -\code{1}{: represents the plots that contains, for each regime, its smoothed and filtered probabilities.}.
       |          ^
checkRd: (-1) plotProb.Rd:31: Lost braces
    31 | -\code{2:(number of regimes +1)}{: represents plot of the regime minus one with the response variable against the smoothed probabilities.}
       |                                 ^
NOTE r-devel-windows-x86_64

Rd files

checkRd: (-1) msmFit.Rd:30: Lost braces
    30 |         -\code{trace}{: A logical value. If it is TRUE, tracing information on the progress of the optimization is produced.}
       |                      ^
checkRd: (-1) msmFit.Rd:32: Lost braces
    32 |         -\code{maxiter}{: The maximum number of iterations in the EM method. Default is 100.}
       |                        ^
checkRd: (-1) msmFit.Rd:34: Lost braces
    34 |         -\code{tol}{: Tolerance. The algorithm stops if it is unable to reduce the value by a factor of \code{tol} at a step. Default is 1e-8.}
       |                    ^
checkRd: (-1) msmFit.Rd:36: Lost braces
    36 |         -\code{maxiterOuter}{: The number of short runs of the EM method to stablish the initial values. Default is 5}
       |                             ^
checkRd: (-1) msmFit.Rd:38: Lost braces
    38 |         -\code{maxiterInner}{: The number of iterations in the EM method in each short run to stablish the initial values. Default is 10}
...[truncated]...
     -\code{parallelization}{: A logical value. Whether the process is done by using parallelization or not. Default is TRUE.}
       |                                ^
checkRd: (-1) plotDiag.Rd:33: Lost braces
    33 | - \code{1}{: represents the plot of residuals against fitted values. }
       |           ^
checkRd: (-1) plotDiag.Rd:35: Lost braces
    35 | - \code{2}{: represents the Normal Q-Q plot. }
       |           ^
checkRd: (-1) plotDiag.Rd:37: Lost braces
    37 | - \code{3}{: represents the ACF/PACF of residuals and ACF/PACF of square residuals. }
       |           ^
checkRd: (-1) plotProb.Rd:29: Lost braces
    29 | -\code{1}{: represents the plots that contains, for each regime, its smoothed and filtered probabilities.}.
       |          ^
checkRd: (-1) plotProb.Rd:31: Lost braces
    31 | -\code{2:(number of regimes +1)}{: represents plot of the regime minus one with the response variable against the smoothed probabilities.}
       |                                 ^
NOTE r-oldrel-macos-arm64

Rd files

checkRd: (-1) msmFit.Rd:30: Lost braces
    30 |         -\code{trace}{: A logical value. If it is TRUE, tracing information on the progress of the optimization is produced.}
       |                      ^
checkRd: (-1) msmFit.Rd:32: Lost braces
    32 |         -\code{maxiter}{: The maximum number of iterations in the EM method. Default is 100.}
       |                        ^
checkRd: (-1) msmFit.Rd:34: Lost braces
    34 |         -\code{tol}{: Tolerance. The algorithm stops if it is unable to reduce the value by a factor of \code{tol} at a step. Default is 1e-8.}
       |                    ^
checkRd: (-1) msmFit.Rd:36: Lost braces
    36 |         -\code{maxiterOuter}{: The number of short runs of the EM method to stablish the initial values. Default is 5}
       |                             ^
checkRd: (-1) msmFit.Rd:38: Lost braces
    38 |         -\code{maxiterInner}{: The number of iterations in the EM method in each short run to stablish the initial values. Default is 10}
...[truncated]...
     -\code{parallelization}{: A logical value. Whether the process is done by using parallelization or not. Default is TRUE.}
       |                                ^
checkRd: (-1) plotDiag.Rd:33: Lost braces
    33 | - \code{1}{: represents the plot of residuals against fitted values. }
       |           ^
checkRd: (-1) plotDiag.Rd:35: Lost braces
    35 | - \code{2}{: represents the Normal Q-Q plot. }
       |           ^
checkRd: (-1) plotDiag.Rd:37: Lost braces
    37 | - \code{3}{: represents the ACF/PACF of residuals and ACF/PACF of square residuals. }
       |           ^
checkRd: (-1) plotProb.Rd:29: Lost braces
    29 | -\code{1}{: represents the plots that contains, for each regime, its smoothed and filtered probabilities.}.
       |          ^
checkRd: (-1) plotProb.Rd:31: Lost braces
    31 | -\code{2:(number of regimes +1)}{: represents plot of the regime minus one with the response variable against the smoothed probabilities.}
       |                                 ^
NOTE r-oldrel-macos-x86_64

Rd files

checkRd: (-1) msmFit.Rd:30: Lost braces
    30 |         -\code{trace}{: A logical value. If it is TRUE, tracing information on the progress of the optimization is produced.}
       |                      ^
checkRd: (-1) msmFit.Rd:32: Lost braces
    32 |         -\code{maxiter}{: The maximum number of iterations in the EM method. Default is 100.}
       |                        ^
checkRd: (-1) msmFit.Rd:34: Lost braces
    34 |         -\code{tol}{: Tolerance. The algorithm stops if it is unable to reduce the value by a factor of \code{tol} at a step. Default is 1e-8.}
       |                    ^
checkRd: (-1) msmFit.Rd:36: Lost braces
    36 |         -\code{maxiterOuter}{: The number of short runs of the EM method to stablish the initial values. Default is 5}
       |                             ^
checkRd: (-1) msmFit.Rd:38: Lost braces
    38 |         -\code{maxiterInner}{: The number of iterations in the EM method in each short run to stablish the initial values. Default is 10}
...[truncated]...
     -\code{parallelization}{: A logical value. Whether the process is done by using parallelization or not. Default is TRUE.}
       |                                ^
checkRd: (-1) plotDiag.Rd:33: Lost braces
    33 | - \code{1}{: represents the plot of residuals against fitted values. }
       |           ^
checkRd: (-1) plotDiag.Rd:35: Lost braces
    35 | - \code{2}{: represents the Normal Q-Q plot. }
       |           ^
checkRd: (-1) plotDiag.Rd:37: Lost braces
    37 | - \code{3}{: represents the ACF/PACF of residuals and ACF/PACF of square residuals. }
       |           ^
checkRd: (-1) plotProb.Rd:29: Lost braces
    29 | -\code{1}{: represents the plots that contains, for each regime, its smoothed and filtered probabilities.}.
       |          ^
checkRd: (-1) plotProb.Rd:31: Lost braces
    31 | -\code{2:(number of regimes +1)}{: represents plot of the regime minus one with the response variable against the smoothed probabilities.}
       |                                 ^
NOTE r-oldrel-windows-x86_64

Rd files

checkRd: (-1) msmFit.Rd:30: Lost braces
    30 |         -\code{trace}{: A logical value. If it is TRUE, tracing information on the progress of the optimization is produced.}
       |                      ^
checkRd: (-1) msmFit.Rd:32: Lost braces
    32 |         -\code{maxiter}{: The maximum number of iterations in the EM method. Default is 100.}
       |                        ^
checkRd: (-1) msmFit.Rd:34: Lost braces
    34 |         -\code{tol}{: Tolerance. The algorithm stops if it is unable to reduce the value by a factor of \code{tol} at a step. Default is 1e-8.}
       |                    ^
checkRd: (-1) msmFit.Rd:36: Lost braces
    36 |         -\code{maxiterOuter}{: The number of short runs of the EM method to stablish the initial values. Default is 5}
       |                             ^
checkRd: (-1) msmFit.Rd:38: Lost braces
    38 |         -\code{maxiterInner}{: The number of iterations in the EM method in each short run to stablish the initial values. Default is 10}
...[truncated]...
     -\code{parallelization}{: A logical value. Whether the process is done by using parallelization or not. Default is TRUE.}
       |                                ^
checkRd: (-1) plotDiag.Rd:33: Lost braces
    33 | - \code{1}{: represents the plot of residuals against fitted values. }
       |           ^
checkRd: (-1) plotDiag.Rd:35: Lost braces
    35 | - \code{2}{: represents the Normal Q-Q plot. }
       |           ^
checkRd: (-1) plotDiag.Rd:37: Lost braces
    37 | - \code{3}{: represents the ACF/PACF of residuals and ACF/PACF of square residuals. }
       |           ^
checkRd: (-1) plotProb.Rd:29: Lost braces
    29 | -\code{1}{: represents the plots that contains, for each regime, its smoothed and filtered probabilities.}.
       |          ^
checkRd: (-1) plotProb.Rd:31: Lost braces
    31 | -\code{2:(number of regimes +1)}{: represents plot of the regime minus one with the response variable against the smoothed probabilities.}
       |                                 ^
NOTE r-patched-linux-x86_64

Rd files

checkRd: (-1) msmFit.Rd:30: Lost braces
    30 |         -\code{trace}{: A logical value. If it is TRUE, tracing information on the progress of the optimization is produced.}
       |                      ^
checkRd: (-1) msmFit.Rd:32: Lost braces
    32 |         -\code{maxiter}{: The maximum number of iterations in the EM method. Default is 100.}
       |                        ^
checkRd: (-1) msmFit.Rd:34: Lost braces
    34 |         -\code{tol}{: Tolerance. The algorithm stops if it is unable to reduce the value by a factor of \code{tol} at a step. Default is 1e-8.}
       |                    ^
checkRd: (-1) msmFit.Rd:36: Lost braces
    36 |         -\code{maxiterOuter}{: The number of short runs of the EM method to stablish the initial values. Default is 5}
       |                             ^
checkRd: (-1) msmFit.Rd:38: Lost braces
    38 |         -\code{maxiterInner}{: The number of iterations in the EM method in each short run to stablish the initial values. Default is 10}
...[truncated]...
     -\code{parallelization}{: A logical value. Whether the process is done by using parallelization or not. Default is TRUE.}
       |                                ^
checkRd: (-1) plotDiag.Rd:33: Lost braces
    33 | - \code{1}{: represents the plot of residuals against fitted values. }
       |           ^
checkRd: (-1) plotDiag.Rd:35: Lost braces
    35 | - \code{2}{: represents the Normal Q-Q plot. }
       |           ^
checkRd: (-1) plotDiag.Rd:37: Lost braces
    37 | - \code{3}{: represents the ACF/PACF of residuals and ACF/PACF of square residuals. }
       |           ^
checkRd: (-1) plotProb.Rd:29: Lost braces
    29 | -\code{1}{: represents the plots that contains, for each regime, its smoothed and filtered probabilities.}.
       |          ^
checkRd: (-1) plotProb.Rd:31: Lost braces
    31 | -\code{2:(number of regimes +1)}{: represents plot of the regime minus one with the response variable against the smoothed probabilities.}
       |                                 ^
NOTE r-release-linux-x86_64

Rd files

checkRd: (-1) msmFit.Rd:30: Lost braces
    30 |         -\code{trace}{: A logical value. If it is TRUE, tracing information on the progress of the optimization is produced.}
       |                      ^
checkRd: (-1) msmFit.Rd:32: Lost braces
    32 |         -\code{maxiter}{: The maximum number of iterations in the EM method. Default is 100.}
       |                        ^
checkRd: (-1) msmFit.Rd:34: Lost braces
    34 |         -\code{tol}{: Tolerance. The algorithm stops if it is unable to reduce the value by a factor of \code{tol} at a step. Default is 1e-8.}
       |                    ^
checkRd: (-1) msmFit.Rd:36: Lost braces
    36 |         -\code{maxiterOuter}{: The number of short runs of the EM method to stablish the initial values. Default is 5}
       |                             ^
checkRd: (-1) msmFit.Rd:38: Lost braces
    38 |         -\code{maxiterInner}{: The number of iterations in the EM method in each short run to stablish the initial values. Default is 10}
...[truncated]...
     -\code{parallelization}{: A logical value. Whether the process is done by using parallelization or not. Default is TRUE.}
       |                                ^
checkRd: (-1) plotDiag.Rd:33: Lost braces
    33 | - \code{1}{: represents the plot of residuals against fitted values. }
       |           ^
checkRd: (-1) plotDiag.Rd:35: Lost braces
    35 | - \code{2}{: represents the Normal Q-Q plot. }
       |           ^
checkRd: (-1) plotDiag.Rd:37: Lost braces
    37 | - \code{3}{: represents the ACF/PACF of residuals and ACF/PACF of square residuals. }
       |           ^
checkRd: (-1) plotProb.Rd:29: Lost braces
    29 | -\code{1}{: represents the plots that contains, for each regime, its smoothed and filtered probabilities.}.
       |          ^
checkRd: (-1) plotProb.Rd:31: Lost braces
    31 | -\code{2:(number of regimes +1)}{: represents plot of the regime minus one with the response variable against the smoothed probabilities.}
       |                                 ^
NOTE r-release-macos-arm64

Rd files

checkRd: (-1) msmFit.Rd:30: Lost braces
    30 |         -\code{trace}{: A logical value. If it is TRUE, tracing information on the progress of the optimization is produced.}
       |                      ^
checkRd: (-1) msmFit.Rd:32: Lost braces
    32 |         -\code{maxiter}{: The maximum number of iterations in the EM method. Default is 100.}
       |                        ^
checkRd: (-1) msmFit.Rd:34: Lost braces
    34 |         -\code{tol}{: Tolerance. The algorithm stops if it is unable to reduce the value by a factor of \code{tol} at a step. Default is 1e-8.}
       |                    ^
checkRd: (-1) msmFit.Rd:36: Lost braces
    36 |         -\code{maxiterOuter}{: The number of short runs of the EM method to stablish the initial values. Default is 5}
       |                             ^
checkRd: (-1) msmFit.Rd:38: Lost braces
    38 |         -\code{maxiterInner}{: The number of iterations in the EM method in each short run to stablish the initial values. Default is 10}
...[truncated]...
     -\code{parallelization}{: A logical value. Whether the process is done by using parallelization or not. Default is TRUE.}
       |                                ^
checkRd: (-1) plotDiag.Rd:33: Lost braces
    33 | - \code{1}{: represents the plot of residuals against fitted values. }
       |           ^
checkRd: (-1) plotDiag.Rd:35: Lost braces
    35 | - \code{2}{: represents the Normal Q-Q plot. }
       |           ^
checkRd: (-1) plotDiag.Rd:37: Lost braces
    37 | - \code{3}{: represents the ACF/PACF of residuals and ACF/PACF of square residuals. }
       |           ^
checkRd: (-1) plotProb.Rd:29: Lost braces
    29 | -\code{1}{: represents the plots that contains, for each regime, its smoothed and filtered probabilities.}.
       |          ^
checkRd: (-1) plotProb.Rd:31: Lost braces
    31 | -\code{2:(number of regimes +1)}{: represents plot of the regime minus one with the response variable against the smoothed probabilities.}
       |                                 ^
NOTE r-release-macos-x86_64

Rd files

checkRd: (-1) msmFit.Rd:30: Lost braces
    30 |         -\code{trace}{: A logical value. If it is TRUE, tracing information on the progress of the optimization is produced.}
       |                      ^
checkRd: (-1) msmFit.Rd:32: Lost braces
    32 |         -\code{maxiter}{: The maximum number of iterations in the EM method. Default is 100.}
       |                        ^
checkRd: (-1) msmFit.Rd:34: Lost braces
    34 |         -\code{tol}{: Tolerance. The algorithm stops if it is unable to reduce the value by a factor of \code{tol} at a step. Default is 1e-8.}
       |                    ^
checkRd: (-1) msmFit.Rd:36: Lost braces
    36 |         -\code{maxiterOuter}{: The number of short runs of the EM method to stablish the initial values. Default is 5}
       |                             ^
checkRd: (-1) msmFit.Rd:38: Lost braces
    38 |         -\code{maxiterInner}{: The number of iterations in the EM method in each short run to stablish the initial values. Default is 10}
...[truncated]...
     -\code{parallelization}{: A logical value. Whether the process is done by using parallelization or not. Default is TRUE.}
       |                                ^
checkRd: (-1) plotDiag.Rd:33: Lost braces
    33 | - \code{1}{: represents the plot of residuals against fitted values. }
       |           ^
checkRd: (-1) plotDiag.Rd:35: Lost braces
    35 | - \code{2}{: represents the Normal Q-Q plot. }
       |           ^
checkRd: (-1) plotDiag.Rd:37: Lost braces
    37 | - \code{3}{: represents the ACF/PACF of residuals and ACF/PACF of square residuals. }
       |           ^
checkRd: (-1) plotProb.Rd:29: Lost braces
    29 | -\code{1}{: represents the plots that contains, for each regime, its smoothed and filtered probabilities.}.
       |          ^
checkRd: (-1) plotProb.Rd:31: Lost braces
    31 | -\code{2:(number of regimes +1)}{: represents plot of the regime minus one with the response variable against the smoothed probabilities.}
       |                                 ^
NOTE r-release-windows-x86_64

Rd files

checkRd: (-1) msmFit.Rd:30: Lost braces
    30 |         -\code{trace}{: A logical value. If it is TRUE, tracing information on the progress of the optimization is produced.}
       |                      ^
checkRd: (-1) msmFit.Rd:32: Lost braces
    32 |         -\code{maxiter}{: The maximum number of iterations in the EM method. Default is 100.}
       |                        ^
checkRd: (-1) msmFit.Rd:34: Lost braces
    34 |         -\code{tol}{: Tolerance. The algorithm stops if it is unable to reduce the value by a factor of \code{tol} at a step. Default is 1e-8.}
       |                    ^
checkRd: (-1) msmFit.Rd:36: Lost braces
    36 |         -\code{maxiterOuter}{: The number of short runs of the EM method to stablish the initial values. Default is 5}
       |                             ^
checkRd: (-1) msmFit.Rd:38: Lost braces
    38 |         -\code{maxiterInner}{: The number of iterations in the EM method in each short run to stablish the initial values. Default is 10}
...[truncated]...
     -\code{parallelization}{: A logical value. Whether the process is done by using parallelization or not. Default is TRUE.}
       |                                ^
checkRd: (-1) plotDiag.Rd:33: Lost braces
    33 | - \code{1}{: represents the plot of residuals against fitted values. }
       |           ^
checkRd: (-1) plotDiag.Rd:35: Lost braces
    35 | - \code{2}{: represents the Normal Q-Q plot. }
       |           ^
checkRd: (-1) plotDiag.Rd:37: Lost braces
    37 | - \code{3}{: represents the ACF/PACF of residuals and ACF/PACF of square residuals. }
       |           ^
checkRd: (-1) plotProb.Rd:29: Lost braces
    29 | -\code{1}{: represents the plots that contains, for each regime, its smoothed and filtered probabilities.}.
       |          ^
checkRd: (-1) plotProb.Rd:31: Lost braces
    31 | -\code{2:(number of regimes +1)}{: represents plot of the regime minus one with the response variable against the smoothed probabilities.}
       |                                 ^

Check History

NOTE 0 OK · 14 NOTE · 0 WARNING · 0 ERROR · 0 FAILURE Mar 10, 2026
NOTE r-devel-linux-x86_64-debian-clang

CRAN incoming feasibility

Maintainer: ‘Josep A. Sanchez-Espigares <josep.a.sanchez@upc.edu>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: c(person(given = c("Josep", "A."),
                      family = "Sanchez-Espigares",
                      role = c("aut", "cre"),
                      email = "josep.a.sanchez@upc.edu"),
               person(given = "Alberto",
                      family = "Lopez-Moreno",
                      role = "aut"))
as necessary.
NOTE r-devel-linux-x86_64-debian-gcc

CRAN incoming feasibility

Maintainer: ‘Josep A. Sanchez-Espigares <josep.a.sanchez@upc.edu>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: c(person(given = c("Josep", "A."),
                      family = "Sanchez-Espigares",
                      role = c("aut", "cre"),
                      email = "josep.a.sanchez@upc.edu"),
               person(given = "Alberto",
                      family = "Lopez-Moreno",
                      role = "aut"))
as necessary.
NOTE r-devel-linux-x86_64-fedora-clang

Rd files

checkRd: (-1) msmFit.Rd:30: Lost braces
    30 |         -\code{trace}{: A logical value. If it is TRUE, tracing information on the progress of the optimization is produced.}
       |                      ^
checkRd: (-1) msmFit.Rd:32: Lost braces
   
...[truncated]...
     |          ^
checkRd: (-1) plotProb.Rd:31: Lost braces
    31 | -\code{2:(number of regimes +1)}{: represents plot of the regime minus one with the response variable against the smoothed probabilities.}
       |                                 ^
NOTE r-devel-linux-x86_64-fedora-gcc

Rd files

checkRd: (-1) msmFit.Rd:30: Lost braces
    30 |         -\code{trace}{: A logical value. If it is TRUE, tracing information on the progress of the optimization is produced.}
       |                      ^
checkRd: (-1) msmFit.Rd:32: Lost braces
   
...[truncated]...
     |          ^
checkRd: (-1) plotProb.Rd:31: Lost braces
    31 | -\code{2:(number of regimes +1)}{: represents plot of the regime minus one with the response variable against the smoothed probabilities.}
       |                                 ^
NOTE r-devel-macos-arm64

Rd files

checkRd: (-1) msmFit.Rd:30: Lost braces
    30 |         -\code{trace}{: A logical value. If it is TRUE, tracing information on the progress of the optimization is produced.}
       |                      ^
checkRd: (-1) msmFit.Rd:32: Lost braces
   
...[truncated]...
     |          ^
checkRd: (-1) plotProb.Rd:31: Lost braces
    31 | -\code{2:(number of regimes +1)}{: represents plot of the regime minus one with the response variable against the smoothed probabilities.}
       |                                 ^
NOTE r-devel-windows-x86_64

Rd files

checkRd: (-1) msmFit.Rd:30: Lost braces
    30 |         -\code{trace}{: A logical value. If it is TRUE, tracing information on the progress of the optimization is produced.}
       |                      ^
checkRd: (-1) msmFit.Rd:32: Lost braces
   
...[truncated]...
     |          ^
checkRd: (-1) plotProb.Rd:31: Lost braces
    31 | -\code{2:(number of regimes +1)}{: represents plot of the regime minus one with the response variable against the smoothed probabilities.}
       |                                 ^
NOTE r-patched-linux-x86_64

Rd files

checkRd: (-1) msmFit.Rd:30: Lost braces
    30 |         -\code{trace}{: A logical value. If it is TRUE, tracing information on the progress of the optimization is produced.}
       |                      ^
checkRd: (-1) msmFit.Rd:32: Lost braces
   
...[truncated]...
     |          ^
checkRd: (-1) plotProb.Rd:31: Lost braces
    31 | -\code{2:(number of regimes +1)}{: represents plot of the regime minus one with the response variable against the smoothed probabilities.}
       |                                 ^
NOTE r-release-linux-x86_64

Rd files

checkRd: (-1) msmFit.Rd:30: Lost braces
    30 |         -\code{trace}{: A logical value. If it is TRUE, tracing information on the progress of the optimization is produced.}
       |                      ^
checkRd: (-1) msmFit.Rd:32: Lost braces
   
...[truncated]...
     |          ^
checkRd: (-1) plotProb.Rd:31: Lost braces
    31 | -\code{2:(number of regimes +1)}{: represents plot of the regime minus one with the response variable against the smoothed probabilities.}
       |                                 ^
NOTE r-release-macos-arm64

Rd files

checkRd: (-1) msmFit.Rd:30: Lost braces
    30 |         -\code{trace}{: A logical value. If it is TRUE, tracing information on the progress of the optimization is produced.}
       |                      ^
checkRd: (-1) msmFit.Rd:32: Lost braces
   
...[truncated]...
     |          ^
checkRd: (-1) plotProb.Rd:31: Lost braces
    31 | -\code{2:(number of regimes +1)}{: represents plot of the regime minus one with the response variable against the smoothed probabilities.}
       |                                 ^
NOTE r-release-macos-x86_64

Rd files

checkRd: (-1) msmFit.Rd:30: Lost braces
    30 |         -\code{trace}{: A logical value. If it is TRUE, tracing information on the progress of the optimization is produced.}
       |                      ^
checkRd: (-1) msmFit.Rd:32: Lost braces
   
...[truncated]...
     |          ^
checkRd: (-1) plotProb.Rd:31: Lost braces
    31 | -\code{2:(number of regimes +1)}{: represents plot of the regime minus one with the response variable against the smoothed probabilities.}
       |                                 ^
NOTE r-release-windows-x86_64

Rd files

checkRd: (-1) msmFit.Rd:30: Lost braces
    30 |         -\code{trace}{: A logical value. If it is TRUE, tracing information on the progress of the optimization is produced.}
       |                      ^
checkRd: (-1) msmFit.Rd:32: Lost braces
   
...[truncated]...
     |          ^
checkRd: (-1) plotProb.Rd:31: Lost braces
    31 | -\code{2:(number of regimes +1)}{: represents plot of the regime minus one with the response variable against the smoothed probabilities.}
       |                                 ^
NOTE r-oldrel-macos-arm64

Rd files

checkRd: (-1) msmFit.Rd:30: Lost braces
    30 |         -\code{trace}{: A logical value. If it is TRUE, tracing information on the progress of the optimization is produced.}
       |                      ^
checkRd: (-1) msmFit.Rd:32: Lost braces
   
...[truncated]...
     |          ^
checkRd: (-1) plotProb.Rd:31: Lost braces
    31 | -\code{2:(number of regimes +1)}{: represents plot of the regime minus one with the response variable against the smoothed probabilities.}
       |                                 ^
NOTE r-oldrel-macos-x86_64

Rd files

checkRd: (-1) msmFit.Rd:30: Lost braces
    30 |         -\code{trace}{: A logical value. If it is TRUE, tracing information on the progress of the optimization is produced.}
       |                      ^
checkRd: (-1) msmFit.Rd:32: Lost braces
   
...[truncated]...
     |          ^
checkRd: (-1) plotProb.Rd:31: Lost braces
    31 | -\code{2:(number of regimes +1)}{: represents plot of the regime minus one with the response variable against the smoothed probabilities.}
       |                                 ^
NOTE r-oldrel-windows-x86_64

Rd files

checkRd: (-1) msmFit.Rd:30: Lost braces
    30 |         -\code{trace}{: A logical value. If it is TRUE, tracing information on the progress of the optimization is produced.}
       |                      ^
checkRd: (-1) msmFit.Rd:32: Lost braces
   
...[truncated]...
     |          ^
checkRd: (-1) plotProb.Rd:31: Lost braces
    31 | -\code{2:(number of regimes +1)}{: represents plot of the regime minus one with the response variable against the smoothed probabilities.}
       |                                 ^

Reverse Dependencies (5)

imports

NTS

suggests

LaMa ggfortify hmmTMB tidyfit

Dependency Network

Dependencies Reverse dependencies nlme NTS LaMa ggfortify hmmTMB tidyfit MSwM

Version History

new 1.5 Mar 10, 2026
updated 1.5 ← 1.4 diff Jun 5, 2021
updated 1.4 ← 1.3 diff Jul 15, 2018
updated 1.3 ← 1.2 diff Jun 11, 2018
updated 1.2 ← 1.01 diff Feb 23, 2014
updated 1.01 ← 1.0 diff Feb 4, 2013
new 1.0 Jan 3, 2013