R Observatory: Metrics for goldi version 1.0.1

Balamuta, James Joseph

doi:10.5281/zenodo.21843040

This package was removed from CRAN on 2022-04-27. Its history is shown below.

Reason: check issues were not corrected in time. length > 1 in && or ||

Details below reflect version 1.0.1, its last release before removal.

goldi

1.0.1

Gene Ontology Label Discernment and Identification

0packages depend

–downloads / year

–test coverage

–checks pass

Overview

About

Maintained by Christopher B. Cole2 releasesCRAN page ↗GitHub ↗

A tool for identifying multiple word key terms in free text with application to Gene Ontology labels.

Install

R (source archive)pak (dev)Ubuntu (r2u)openSUSE (OBS)

url <- "https://cran.r-project.org/src/contrib/Archive/goldi/goldi_1.0.1.tar.gz"
pkgFile <- "goldi_1.0.1.tar.gz"
download.file(url, pkgFile)
install.packages(pkgFile, type = "source", repos = NULL)

This package is no longer on CRAN, so install.packages() cannot fetch it by name. This downloads the last archived source (1.0.1) and builds it locally. Install its dependencies first, and note that building from source needs the usual compiler toolchain.

if (!requireNamespace("pak", quietly = TRUE))
  install.packages("pak", repos = "https://cloud.r-project.org/")
pak::pak("Chris1221/goldi")

Development version from Chris1221/goldi. Installs pak first if it is not already available.

Release

# enable cranapt (r2u) if it is not already set up, then install
grep -rqs r2u.stat.illinois.edu /etc/apt/sources.list /etc/apt/sources.list.d/ \
  || curl -fsSL https://raw.githubusercontent.com/eddelbuettel/r2u/master/inst/scripts/add_cranapt_noble.sh | sudo bash
sudo apt install -y r-cran-goldi

Fast Ubuntu binaries via r2u (no compilation). The cranapt setup runs once and is skipped when it is already enabled.

bspm (used by r2u) also needs make: sudo apt install make

# add the autoCRAN OBS repo (Tumbleweed) if it is missing, then install
zypper -q lr | grep -qi autoCRAN \
  || sudo zypper addrepo https://download.opensuse.org/repositories/devel:/languages:/R:/autoCRAN/openSUSE_Tumbleweed/devel:languages:R:autoCRAN.repo
sudo zypper install -y R-goldi

RPMs auto-built from CRAN on openSUSE OBS (Tumbleweed).

Health

CRAN checks

CRAN check results are not tracked yet.

Code health

Yes

Tests · ratio 0.04

not tracked

Coverage

100%

Documentation · exports

6

Dependencies · direct

Documentation

READMENoVignettesYes · dynamicpkgdown siteNoNEWSYes · 67% structuredCode of conductNoContributing guideNo

Examples that run: 0%
Documented parameters: 100%
Return-value docs: 57%
References docs: 27%

Downloads

Releases R versions

Daily download trend is not available in this view yet.

Compare downloads with other packages →

Also on14 r2u17 autocran

Dependencies

Declared dependencies

14 external dependencies (excludes base and recommended)

Depends (1)

R >= 2.15.0

Imports (6)

dplyr Rcpp tm SnowballC magrittr futile.logger

LinkingTo (2)

Rcpp RcppArmadillo

Suggests (6)

testthat covr rmarkdown knitr pdftools RISmed

Enhances (0)

none

Dependency license breakdown →

Reverse dependencies

0direct

–indirect (not tracked)

Nothing depends on this yet.

Code & Tests

Datasets

People & History

People (3)

Maintainer (1)

Christopher B. Cole

Author, Maintainer, Copyright holder

Authors (1)

Christopher B. Cole

Author, Maintainer, Copyright holder

Contributors (2)

Sejal Patel

Contributor

Jo Knight

Contributor

Copyright holders (1)

Christopher B. Cole

Author, Maintainer, Copyright holder

Package Timeline

2 releases. Pick two to compare their code metrics. R releases are shown for context.

R
R 4.3.0 released · 2023-04-21
archivedRemoved from CRAN
2022-04-27
check issues were not corrected in time length > 1 in && or ||
R
R 4.2.0 released · 2022-04-22
R
R 4.1.0 released · 2021-05-18
R
R 4.0.0 released · 2020-04-24
R
R 3.6.0 released · 2019-04-26
R
R 3.5.0 released · 2018-04-23
1.0.1
2017-06-28 · diff ↗
unarchivedReturned to CRAN
2017-06-28
R
R 3.4.0 released · 2017-04-21
archivedRemoved from CRAN
2017-03-26
check problems were not corrected despite reminders
1.0.0
2016-10-17
R
R 3.3.0 released · 2016-05-03

Package metadata

Total releases: 2
License: MIT + file LICENSE OSI
Minimum R: ≥ 2.15.0
Bundled data: 285 KB / 2 files
Download size: not tracked yet
Installed size: not tracked yet
With dependencies: not tracked yet

Cite

Cite this package

Run in R for the authors' preferred citation:

citation("goldi")

Format

Cole, C. B., Patel, S., & Knight, J. (n.d.). goldi: Gene Ontology Label Discernment and Identification (Version 1.0.1) [Computer software]. Retrieved August 13, 2026, from https://CRAN.R-project.org/package=goldi

This is what citation() produces when a package has no citation file of its own. If it prints something else, use that.

Cite the R Observatory

For a number measured here: a download total, a coverage figure, an archival date.

Format

APA

Balamuta, J. J. (2026). R Observatory: Metrics for goldi version 1.0.1 [Data set]. HJJB, LLC. Data release v2026-08-11. https://doi.org/10.5281/zenodo.21843040

From data release v2026-08-11, which the citation names so these numbers can be found later. More on citing and the projects behind them.

Report a problem with this page →