R Observatory: Metrics for gdim version 0.1.1

Balamuta, James Joseph

doi:10.5281/zenodo.21843040

gdim

0.1.1Package record

Estimate Graph Dimension using Cross-Validated Eigenvalues

0packages depend

2.5Kdownloads / year

69.8%test coverage

13/13flavors OK

Overview

About

Maintained by Alex HayesCRAN page ↗GitHub ↗Website ↗Issues ↗

Cross-validated eigenvalues are estimated by splitting a graph into two parts, the training and the test graph. The training graph is used to estimate eigenvectors, and the test graph is used to evaluate the correlation between the training eigenvectors and the eigenvectors of the test graph. The correlations follow a simple central limit theorem that can be used to estimate graph dimension via hypothesis testing, see Chen et al. (2021) doi:10.48550/arXiv.2108.03336 for details.

Changes in 0.1.1

Improved compatibility with fastRG 0.4.0.

From NEWS.md in the release

Install

R (CRAN)pak (dev)Ubuntu (r2u)Fedora (COPR)openSUSE (OBS)

install.packages("gdim", repos = "https://cloud.r-project.org/")

Installs the current CRAN release. Prebuilt binaries on Windows and macOS.

if (!requireNamespace("pak", quietly = TRUE))
  install.packages("pak", repos = "https://cloud.r-project.org/")
pak::pak("RoheLab/gdim")

Development version from RoheLab/gdim. Installs pak first if it is not already available.

Release

# enable cranapt (r2u) if it is not already set up, then install
grep -rqs r2u.stat.illinois.edu /etc/apt/sources.list /etc/apt/sources.list.d/ \
  || curl -fsSL https://raw.githubusercontent.com/eddelbuettel/r2u/master/inst/scripts/add_cranapt_noble.sh | sudo bash
sudo apt install -y r-cran-gdim

Fast Ubuntu binaries via r2u (no compilation). The cranapt setup runs once and is skipped when it is already enabled. We list this channel from recorded r2u download activity rather than from a live index of the repository, so treat it as last known rather than guaranteed.

bspm (used by r2u) also needs make: sudo apt install make

# enable the iucar/cran COPR if it is not already present, then install
ls /etc/yum.repos.d/*iucar*cran*.repo >/dev/null 2>&1 \
  || sudo dnf copr enable -y iucar/cran
sudo dnf install -y R-CRAN-gdim

RPMs from the iucar/cran COPR, rebuilt from CRAN.

For install.packages() integration in R, also: sudo dnf install R-CoprManager

# add the autoCRAN OBS repo (Tumbleweed) if it is missing, then install
zypper -q lr | grep -qi autoCRAN \
  || sudo zypper addrepo https://download.opensuse.org/repositories/devel:/languages:/R:/autoCRAN/openSUSE_Tumbleweed/devel:languages:R:autoCRAN.repo
sudo zypper install -y R-gdim

RPMs auto-built from CRAN on openSUSE OBS (Tumbleweed). We list this channel from recorded autoCRAN download activity rather than from a live index of the repository, so treat it as last known rather than guaranteed.

Health

CRAN checks

13OK

CRAN check page ↗

Slowest check: 2.1 min · r-oldrel-windows-x86_64

Status changes

OK13 OK2026-08-05
NOTE12 OK, 1 NOTE2026-08-01
OK14 OK2026-03-10

Advisories

none known

How this is measured·How advisories are found

Documentation

In release 0.1.1

READMEYes · 206 wordsVignettesNoNEWSYes · 100% structured · mentions 0.1.1Citation fileNoWebsiteYes · pkgdown

Help pages: 4 (1 internal)includes a package overview page
Examples that run: 100%3 run in a plain check
Exported functions with examples: 100%
Documented parameters: 100%
Return-value docs: 100%
Help pages citing references: 0%

How these are measured

Downloads

2.5K

CRAN downloads in the past year

Rank #16,752 · ~7/day · ~205/mo

Releases R versions

Daily download trend is not available in this view yet.

31930 days

75390 days

2.5K1 year

Compare downloads with other packages →

Also on84 r2u5 autocran

How downloads are counted

Repository

rohelab/gdim ↗Organization: RoheLab

7Stars

1Forks

4Open issues

0Open PRs

2Releases

40Commits

3Commit identities

License file reads as GPL-3.0 · 40 commits · Last activity 2025-12-08 · The default branch showed an older version (0.1.0.9000) than CRAN on 2026-10-18

Responsiveness

How these are sampled

PRs merged (all time): not measured
Median days to close, 50 most recently updated closed issues: 917
Median days to close, 50 most recently updated closed PRs: not measured

Stars over time

2024-11-18 · 72026-07-07 · 7

How these are measured

PracticesBeta

8 development-tooling and community-health practices detected across 4 families in the upstream repository

Checks run against github.com/rohelab/gdim on 2026-10-18.

Continuous integration (2)

GitHub ActionsR CMD check workflow

The R CMD check workflow runs on Linux, macOS and Windows, and on R-devel

Docs source (4)

README.Rmdpkgdown

GitHub Pages site last deployed 2025-12-08 · The repository has a site deploy workflow

pkgdown site last built 2023-09-05, before release 0.1.1 (2025-12-09)

Coverage (1)

Coverage reporting (Codecov)

CRAN release process (1)

cran-comments.md

How this is detected·Detection ruleset v3 (2026-09-26)

Dependencies

Declared dependencies

9 external dependencies (excludes base and recommended)

Installing gdim adds 30 packages (13 with compiled code, 17 MB of source tarballs). Heaviest: ggplot2 6.0 MB, isoband 1.5 MB, farver 1.2 MB.

Depends (2)

R >= 4.1Matrix

Imports (8)

dplyr ggplot2 irlbamethodsprogress rlangstatstibble

LinkingTo (0)

none

Suggests (3)

epca fastRG testthat

Enhances (0)

none

Dependency license breakdown →

Reverse dependencies

0direct

0indirect

Nothing depends on this yet.

How these are counted

Code & Tests

People & History

People (3)

Alex Hayes

Fan Chen

Author

Karl Rohe

Author

Releases (2)

Pick two releases to compare their code metrics.

R
R 4.6.0 released · 2026-04-24
0.1.1Latest
record
2025-12-09 · current release · diff ↗ ·
removed 1 export
%>%
R
R 4.5.0 released · 2025-04-11
R
R 4.4.0 released · 2024-04-24
0.1.0
record
2023-09-05
R
R 4.3.0 released · 2023-04-21

Package metadata

First published: 2023-09-05
Total releases: 2 / 3 yrs
License: GPL (>= 3) OSI
Minimum R: ≥ 4.1
Download size: 26 KB

Cite

Cite this package

Run in R for the authors' preferred citation:

citation("gdim")

Format

Hayes, A., Chen, F., & Rohe, K. (2025). gdim: Estimate Graph Dimension using Cross-Validated Eigenvalues (Version 0.1.1) [Computer software]. https://doi.org/10.32614/CRAN.package.gdim

This package has no citation file, so citation() returns this entry built from DESCRIPTION.

Cite the R Observatory

For a number measured here: a download total, a coverage figure, an archival date.

Format

APA

Balamuta, J. J. (2026). R Observatory: Metrics for gdim version 0.1.1 [Data set]. HJJB, LLC. Data release v2026-10-22. https://doi.org/10.5281/zenodo.21843040

From data release v2026-10-22, which the citation names so these numbers can be found later. More on citing and the projects behind them.

Report a problem with this page →