R Observatory: Metrics for fuseMLR version 0.0.4

Balamuta, James Joseph

doi:10.5281/zenodo.21843040

fuseMLR

0.0.4

Fusing Machine Learning in R

0packages depend

6.3Kdownloads / year

87.5%test coverage

13/13checks pass

Overview

About

Maintained by Cesaire J. K. FouodoFirst published 2024-12-173 releasesCRAN page ↗GitHub ↗

Recent technological advances have enable the simultaneous collection of multi-omics data i.e., different types or modalities of molecular data, presenting challenges for integrative prediction modeling due to the heterogeneous, high-dimensional nature and possible missing modalities of some individuals. We introduce this package for late integrative prediction modeling, enabling modality-specific variable selection and prediction modeling, followed by the aggregation of the modality-specific predictions to train a final meta-model. This package facilitates conducting late integration predictive modeling in a systematic, structured, and reproducible way.

Install

R (CRAN)pak (dev)Ubuntu (r2u)Fedora (COPR)openSUSE (OBS)

install.packages("fuseMLR", repos = "https://cloud.r-project.org/")

Installs the current CRAN release. Prebuilt binaries on Windows and macOS.

if (!requireNamespace("pak", quietly = TRUE))
  install.packages("pak", repos = "https://cloud.r-project.org/")
pak::pak("imbs-hl/fuseMLR")

Development version from imbs-hl/fuseMLR. Installs pak first if it is not already available.

Release

# enable cranapt (r2u) if it is not already set up, then install
grep -rqs r2u.stat.illinois.edu /etc/apt/sources.list /etc/apt/sources.list.d/ \
  || curl -fsSL https://raw.githubusercontent.com/eddelbuettel/r2u/master/inst/scripts/add_cranapt_noble.sh | sudo bash
sudo apt install -y r-cran-fusemlr

Fast Ubuntu binaries via r2u (no compilation). The cranapt setup runs once and is skipped when it is already enabled.

bspm (used by r2u) also needs make: sudo apt install make

# enable the iucar/cran COPR if it is not already present, then install
ls /etc/yum.repos.d/*iucar*cran*.repo >/dev/null 2>&1 \
  || sudo dnf copr enable -y iucar/cran
sudo dnf install -y R-CRAN-fuseMLR

RPMs from the iucar/cran COPR, rebuilt from CRAN.

For install.packages() integration in R, also: sudo dnf install R-CoprManager

# add the autoCRAN OBS repo (Tumbleweed) if it is missing, then install
zypper -q lr | grep -qi autoCRAN \
  || sudo zypper addrepo https://download.opensuse.org/repositories/devel:/languages:/R:/autoCRAN/openSUSE_Tumbleweed/devel:languages:R:autoCRAN.repo
sudo zypper install -y R-fuseMLR

RPMs auto-built from CRAN on openSUSE OBS (Tumbleweed).

Health

CRAN checks

13OK

Slowest check: 2.6 min · r-oldrel-windows-x86_64

Code health

Yes

Tests · ratio 0.22

87.5%

Coverage · measured lines

100%

Documentation · exports

3

Dependencies · direct

Check history

OK2026-08-05
13 OK · 0 NOTE · 0 WARNING · 0 ERROR · 0 FAILURE
NOTE2026-08-01
12 OK · 1 NOTE · 0 WARNING · 0 ERROR · 0 FAILURE
OK2026-06-09
13 OK · 0 NOTE · 0 WARNING · 0 ERROR · 0 FAILURE
ERROR2026-06-08
12 OK · 0 NOTE · 0 WARNING · 1 ERROR · 0 FAILURE
OK2026-03-10
14 OK · 0 NOTE · 0 WARNING · 0 ERROR · 0 FAILURE

Documentation

READMEYes · 395 wordsVignettesYes · dynamicpkgdown siteNoNEWSNoCode of conductNoContributing guideNo

Examples that run: 100%
Documented parameters: 100%
Return-value docs: 39%
References docs: 12%

Downloads

6.3K

CRAN downloads in the past year

Rank #7,893 · ~17/day · ~521/mo

Releases R versions

Daily download trend is not available in this view yet.

16230 days

1.2K90 days

6.3K1 year

Compare downloads with other packages →

Also on137 r2u15 autocran

Repository

GitHub ↗ imbs-hl/fusemlr

7Stars

0Forks

1Open issues

0Open PRs

1Releases

313Commits

3Contributors

313 commits · Last activity 2026-05-19 · 0% stars, 30d

Stars over time

2024-12-29 · 62026-07-07 · 7

Repository practices

Upstream repositoryBeta

4 development-tooling and community-health practices detected across 4 families in the upstream repository

Checks run against github.com/imbs-hl/fusemlr on 2026-08-09.

Continuous integration (1)

GitHub Actions

Docs source (1)

README.Rmd

Lint, format, editor (1)

RStudio project

Coverage (1)

.covrignore

How this is detected·Detection ruleset v1 (2026-07-18)

Dependencies

Declared dependencies

12 external dependencies (excludes base and recommended)

Depends (1)

R >= 3.6.0

Imports (3)

R6statsdigest

LinkingTo (0)

none

Suggests (10)

testthat UpSetR caret ranger glmnet Boruta knitr rmarkdown pROC checkmate

Enhances (0)

none

Dependency license breakdown →

Reverse dependencies

0direct

0indirect

Nothing depends on this yet.

Code & Tests

People & History

People (2)

Maintainer (1)

Cesaire J. K. Fouodo

Author, Maintainer

Authors (1)

Cesaire J. K. Fouodo

Author, Maintainer

Contributors (1)

Marina Bleskina

Contributor

Package Timeline

3 releases. Pick two to compare their code metrics. R releases are shown for context.

0.0.4Latest
2026-05-20 · current release · diff ↗
unarchivedReturned to CRAN
2026-05-20
archivedRemoved from CRAN
2026-05-16
email to the maintainer is undeliverable
R
R 4.6.0 released · 2026-04-24
0.0.2
2025-10-13 · diff ↗
R
R 4.5.0 released · 2025-04-11
0.0.1
2024-12-17
R
R 4.4.0 released · 2024-04-24

Package metadata

First published: 2024-12-17
Total releases: 3 / 2 yrs
License: GPL-3 OSI
Minimum R: ≥ 3.6.0
Bundled data: 357 KB / 1 file
Download size: 512 KB
Installed size: not tracked yet
With dependencies: not tracked yet

Cite

Cite this package

Run in R for the authors' preferred citation:

citation("fuseMLR")

Format

K. Fouodo, C. J., & Bleskina, M. (2026). fuseMLR: Fusing Machine Learning in R (Version 0.0.4) [Computer software]. https://doi.org/10.32614/CRAN.package.fuseMLR

This is what citation() produces when a package has no citation file of its own. If it prints something else, use that.

Cite the R Observatory

For a number measured here: a download total, a coverage figure, an archival date.

Format

APA

Balamuta, J. J. (2026). R Observatory: Metrics for fuseMLR version 0.0.4 [Data set]. HJJB, LLC. Data release v2026-08-15. https://doi.org/10.5281/zenodo.21843040

From data release v2026-08-15, which the citation names so these numbers can be found later. More on citing and the projects behind them.

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