R Observatory: Metrics for fat2Lpoly version 1.2.6

Balamuta, James Joseph

doi:10.5281/zenodo.21843040

fat2Lpoly

1.2.6Package record

Two-Locus Family-Based Association Test with Polytomous Outcome

0packages depend

2.8Kdownloads / year

–test coverage

13/13flavors OK

Overview

About

Maintained by Alexandre BureauCRAN page ↗Website ↗

Performs family-based association tests with a polytomous outcome under 2-locus and 1-locus models defined by some design matrix.

Install

R (CRAN)Ubuntu (r2u)Fedora (COPR)openSUSE (OBS)

install.packages("fat2Lpoly", repos = "https://cloud.r-project.org/")

Installs the current CRAN release. Prebuilt binaries on Windows and macOS.

Release

# enable cranapt (r2u) if it is not already set up, then install
grep -rqs r2u.stat.illinois.edu /etc/apt/sources.list /etc/apt/sources.list.d/ \
  || curl -fsSL https://raw.githubusercontent.com/eddelbuettel/r2u/master/inst/scripts/add_cranapt_noble.sh | sudo bash
sudo apt install -y r-cran-fat2lpoly

Fast Ubuntu binaries via r2u (no compilation). The cranapt setup runs once and is skipped when it is already enabled. We list this channel from recorded r2u download activity rather than from a live index of the repository, so treat it as last known rather than guaranteed.

bspm (used by r2u) also needs make: sudo apt install make

# enable the iucar/cran COPR if it is not already present, then install
ls /etc/yum.repos.d/*iucar*cran*.repo >/dev/null 2>&1 \
  || sudo dnf copr enable -y iucar/cran
sudo dnf install -y R-CRAN-fat2Lpoly

RPMs from the iucar/cran COPR, rebuilt from CRAN.

For install.packages() integration in R, also: sudo dnf install R-CoprManager

# add the autoCRAN OBS repo (Tumbleweed) if it is missing, then install
zypper -q lr | grep -qi autoCRAN \
  || sudo zypper addrepo https://download.opensuse.org/repositories/devel:/languages:/R:/autoCRAN/openSUSE_Tumbleweed/devel:languages:R:autoCRAN.repo
sudo zypper install -y R-fat2Lpoly

RPMs auto-built from CRAN on openSUSE OBS (Tumbleweed). We list this channel from recorded autoCRAN download activity rather than from a live index of the repository, so treat it as last known rather than guaranteed.

Health

CRAN checks

13OK

CRAN check page ↗

Slowest check: 2.1 min · r-oldrel-windows-x86_64

Status changes

OK13 OK2026-08-05
NOTE12 OK, 1 NOTE2026-08-01
OK14 OK2026-03-10

Advisories

none known

How this is measured·How advisories are found

Documentation

In release 1.2.6

READMENoVignettesNoNEWSNoCitation fileNoWebsiteYes

Help pages: 11 (1 internal)
Examples that run: 100%6 run in a plain check
Exported functions with examples: 44%
Documented parameters: 100%
Return-value docs: 89%
Help pages citing references: 45%

How these are measured

Downloads

2.8K

CRAN downloads in the past year

Rank #15,046 · ~8/day · ~237/mo

Releases R versions

Daily download trend is not available in this view yet.

32530 days

80490 days

2.8K1 year

Compare downloads with other packages →

Also on66 r2u4 autocran

How downloads are counted

Dependencies

Declared dependencies

2 external dependencies (excludes base and recommended)

Installing fat2Lpoly adds 14 packages (8 with compiled code, 7.1 MB of source tarballs). Heaviest: Rcpp 1.8 MB, VGAM 1.7 MB, RcppArmadillo 1.0 MB.

Depends (1)

R >= 3.2

Imports (2)

kinship2 multgee

LinkingTo (0)

none

Suggests (0)

none

Enhances (0)

none

Dependency license breakdown →

Reverse dependencies

0direct

0indirect

Nothing depends on this yet.

How these are counted

Code & Tests

Datasets

People & History

People (2)

Alexandre Bureau

Author, Maintainer since 1.0.2 (2014)

Jordie Croteau

Author

Releases (7)

Pick two releases to compare their code metrics.

R
R 4.6.0 released · 2026-04-24
1.2.6Latest
record
2025-07-23 · current release · diff ↗
R
R 4.5.0 released · 2025-04-11
R
R 4.4.0 released · 2024-04-24
R
R 4.3.0 released · 2023-04-21
R
R 4.2.0 released · 2022-04-22
1.2.5
record
2022-01-04 · diff ↗
R
R 4.1.0 released · 2021-05-18
R
R 4.0.0 released · 2020-04-24
1.2.4
record
2019-12-18 · diff ↗
R
R 3.6.0 released · 2019-04-26
1.2.3
record
2018-05-17 · diff ↗
R
R 3.5.0 released · 2018-04-23
R
R 3.4.0 released · 2017-04-21
R
R 3.3.0 released · 2016-05-03
1.2.2
record
2015-10-21 · diff ↗

Show 5 earlier eventsHide 5 earlier events

R
R 3.2.0 released · 2015-04-16
1.1.1
record
2014-10-17 · diff ↗ ·
added 2 exports
calcule.poids.Chen, calcule.poids.alphafixe
R
R 3.1.0 released · 2014-04-10
1.0.2
record
2014-04-02
R
R 3.0.0 released · 2013-04-03

Package metadata

First published: 2014-04-02
Total releases: 7 / 12 yrs
License: GPL
Minimum R: ≥ 3.2
Bundled data: 211 KB / 2 files
Download size: 370 KB

Cite

Cite this package

Run in R for the authors' preferred citation:

citation("fat2Lpoly")

Format

Bureau, A., & Croteau, J. (2025). fat2Lpoly: Two-Locus Family-Based Association Test with Polytomous Outcome (Version 1.2.6) [Computer software]. https://doi.org/10.32614/CRAN.package.fat2Lpoly

This package has no citation file, so citation() returns this entry built from DESCRIPTION.

Cite the R Observatory

For a number measured here: a download total, a coverage figure, an archival date.

Format

APA

Balamuta, J. J. (2026). R Observatory: Metrics for fat2Lpoly version 1.2.6 [Data set]. HJJB, LLC. Data release v2026-10-22. https://doi.org/10.5281/zenodo.21843040

From data release v2026-10-22, which the citation names so these numbers can be found later. More on citing and the projects behind them.

Report a problem with this page →