Skip to content

fastbeta

Fast Approximation of Time-Varying Infectious Disease Transmission Rates

v0.5.1 · Oct 26, 2025 · GPL (>= 2)
CRAN GitHub Mirror

Description

A fast method for approximating time-varying infectious disease transmission rates from disease incidence time series and other data, based on a discrete time approximation of an SEIR model, as analyzed in Jagan et al. (2020) <doi:10.1371/journal.pcbi.1008124>.

Downloads

231

Last 30 days

19756th

593

Last 90 days

2.8K

Last year

Trend: +13.8% (30d vs prior 30d)

CRAN Check Status

14 OK
Show all 14 flavors
Flavor Status
r-devel-linux-x86_64-debian-clang OK
r-devel-linux-x86_64-debian-gcc OK
r-devel-linux-x86_64-fedora-clang OK
r-devel-linux-x86_64-fedora-gcc OK
r-devel-macos-arm64 OK
r-devel-windows-x86_64 OK
r-oldrel-macos-arm64 OK
r-oldrel-macos-x86_64 OK
r-oldrel-windows-x86_64 OK
r-patched-linux-x86_64 OK
r-release-linux-x86_64 OK
r-release-macos-arm64 OK
r-release-macos-x86_64 OK
r-release-windows-x86_64 OK

Check History

OK 14 OK · 0 NOTE · 0 WARNING · 0 ERROR · 0 FAILURE Mar 10, 2026

Version History

new 0.5.1 Mar 10, 2026
updated 0.5.1 ← 0.5.0 diff Oct 25, 2025
updated 0.5.0 ← 0.4.0 diff Oct 14, 2025
updated 0.4.0 ← 0.3.2 diff Apr 27, 2025
updated 0.3.2 ← 0.3.1 diff Mar 23, 2025
updated 0.3.1 ← 0.3.0 diff Nov 21, 2024
updated 0.3.0 ← 0.2.0 diff May 17, 2024
updated 0.2.0 ← 0.1.1 diff Dec 11, 2023
updated 0.1.1 ← 0.1.0 diff Nov 27, 2023
new 0.1.0 Aug 27, 2023