R Observatory: Metrics for episode version 1.0.0

Balamuta, James Joseph

doi:10.5281/zenodo.21843040

This package was removed from CRAN on 2019-12-01. Its history is shown below.

Reason: installation warnings were not addressed despite reminders

Details below reflect version 1.0.0, its last release before removal.

episode

1.0.0

Estimation with Penalisation in Systems of Ordinary Differential Equations

0packages depend

–downloads / year

–test coverage

–checks pass

Overview

About

Maintained by Frederik Vissing Mikkelsen1 releasesCRAN page ↗

A set of statistical tools for inferring unknown parameters in continuous time processes governed by ordinary differential equations (ODE). Moreover, variance reduction and model selection can be obtained through various implemented penalisation schemes. The package offers two estimation procedures: exact estimation via least squares and a faster approximate estimation via inverse collocation methods. All estimators can handle multiple data sets arising from the same ODE system, but subjected to different interventions.

Install

R (source archive)

url <- "https://cran.r-project.org/src/contrib/Archive/episode/episode_1.0.0.tar.gz"
pkgFile <- "episode_1.0.0.tar.gz"
download.file(url, pkgFile)
install.packages(pkgFile, type = "source", repos = NULL)

This package is no longer on CRAN, so install.packages() cannot fetch it by name. This downloads the last archived source (1.0.0) and builds it locally. Install its dependencies first, and note that building from source needs the usual compiler toolchain.

Health

CRAN checks

CRAN check results are not tracked yet.

Code health

Yes

Tests · ratio 0.26

not tracked

Coverage

100%

Documentation · exports

6

Dependencies · direct

Documentation

READMENoVignettesYes · dynamicpkgdown siteNoNEWSNoCode of conductNoContributing guideNo

Examples that run: 100%
Documented parameters: 84%
Return-value docs: 100%
References docs: 0%

Downloads

episode Releases R versions

Daily download trend is not available in this view yet.

Compare downloads with other packages →

Dependencies

Declared dependencies

9 external dependencies (excludes base and recommended)

Depends (1)

R >= 3.4.0

Imports (6)

Matrixglmnet Rcppmethodsstatsnnls

LinkingTo (2)

Rcpp RcppArmadillo

Suggests (4)

testthat knitr rmarkdown devtools

Enhances (0)

none

Dependency license breakdown →

Reverse dependencies

0direct

–indirect (not tracked)

Nothing depends on this yet.

Code & Tests

People & History

People (1)

Maintainer (1)

Frederik Vissing Mikkelsen

Author, Maintainer

Authors (1)

Frederik Vissing Mikkelsen

Author, Maintainer

Package Timeline

1 release. R releases are shown for context.

R
R 4.0.0 released · 2020-04-24
archivedRemoved from CRAN
2019-12-01
installation warnings were not addressed despite reminders
R
R 3.6.0 released · 2019-04-26
R
R 3.5.0 released · 2018-04-23
1.0.0
2017-10-29
R
R 3.4.0 released · 2017-04-21

Package metadata

Total releases: 1
License: GPL-3 OSI
Minimum R: ≥ 3.4.0
Download size: not tracked yet
Installed size: not tracked yet
With dependencies: not tracked yet

Cite

Cite this package

Run in R for the authors' preferred citation:

citation("episode")

Format

Mikkelsen, F. V. (n.d.). episode: Estimation with Penalisation in Systems of Ordinary Differential Equations (Version 1.0.0) [Computer software]. Retrieved August 14, 2026, from https://CRAN.R-project.org/package=episode

This is what citation() produces when a package has no citation file of its own. If it prints something else, use that.

Cite the R Observatory

For a number measured here: a download total, a coverage figure, an archival date.

Format

APA

Balamuta, J. J. (2026). R Observatory: Metrics for episode version 1.0.0 [Data set]. HJJB, LLC. Data release v2026-08-13. https://doi.org/10.5281/zenodo.21843040

From data release v2026-08-13, which the citation names so these numbers can be found later. More on citing and the projects behind them.

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