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epiparameter

Classes and Helper Functions for Working with Epidemiological Parameters

v0.4.1 · Jan 23, 2025 · MIT + file LICENSE

Description

Classes and helper functions for loading, extracting, converting, manipulating, plotting and aggregating epidemiological parameters for infectious diseases. Epidemiological parameters extracted from the literature are loaded from the 'epiparameterDB' R package.

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CRAN Check Status

14 OK
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r-devel-linux-x86_64-debian-clang OK
r-devel-linux-x86_64-debian-gcc OK
r-devel-linux-x86_64-fedora-clang OK
r-devel-linux-x86_64-fedora-gcc OK
r-devel-macos-arm64 OK
r-devel-windows-x86_64 OK
r-oldrel-macos-arm64 OK
r-oldrel-macos-x86_64 OK
r-oldrel-windows-x86_64 OK
r-patched-linux-x86_64 OK
r-release-linux-x86_64 OK
r-release-macos-arm64 OK
r-release-macos-x86_64 OK
r-release-windows-x86_64 OK

Check History

OK 14 OK · 0 NOTE · 0 WARNING · 0 ERROR · 0 FAILURE Mar 30, 2026
ERROR 13 OK · 0 NOTE · 0 WARNING · 1 ERROR · 0 FAILURE Mar 10, 2026
ERROR r-devel-macos-arm64

tests

Running ‘spelling.R’ [0s/0s]
  Running ‘testthat.R’ [42s/43s]
Running the tests in ‘tests/testthat.R’ failed.
Complete output:
  > # This file is part of the standard setup for testthat.
  > # It is recommended that you do not modify it.
  > #
  > # 
...[truncated]...
  0.0
  
  `actual$message`:   "ERROR: ABNORMAL_TERMINATION_IN_LNSRCH"           
  `expected$message`: "CONVERGENCE: NORM OF PROJECTED GRADIENT <= PGTOL"
  
  
  [ FAIL 1 | WARN 2 | SKIP 30 | PASS 523 ]
  Error:
  ! Test failures.
  Execution halted

Reverse Dependencies (2)

imports

suggests

Dependency Network

Dependencies Reverse dependencies cachem checkmate cli distcrete distributional epiparameterDB lifecycle pillar rlang simulist superspreading epiparameter

Version History

new 0.4.1 Mar 10, 2026
updated 0.4.1 ← 0.4.0 diff Jan 23, 2025
new 0.4.0 Jan 7, 2025