R Observatory: Metrics for ecoXCorr version 0.2.2

Balamuta, James Joseph

doi:10.5281/zenodo.21843040

ecoXCorr needs insight (through performance), which CRAN will archive unless its check problems are fixed by Nov 14.

ecoXCorr

0.2.2Package record

Lagged Cross-Correlation Analysis of Environmental Time Series

0packages depend

2.8Kdownloads / year

31.1%test coverage

13/13flavors OK

Overview

About

Maintained by Nicolas MoirouxCRAN page ↗GitHub ↗Issues ↗

Tools for analysing lagged relationships between environmental variables and ecological or epidemiological time series. The package implements a workflow to aggregate meteorological data over multiple lagged intervals, fit regression models, including mixed-effect models using 'glmmTMB', for each lag window, and visualise varied models outcomes (effect strength and direction, model prediction error...) using cross-correlation maps ('CCM').

Changes in 0.2.2

Bug fixes

Correct default value for arg shift in ecoXCorr() function (from -1 to 1)

Improvements

Correct R code output of the shiny app.

From NEWS.md in the release

Install

R (CRAN)pak (dev)Ubuntu (r2u)Fedora (COPR)openSUSE (OBS)

install.packages("ecoXCorr", repos = "https://cloud.r-project.org/")

Installs the current CRAN release. Prebuilt binaries on Windows and macOS.

if (!requireNamespace("pak", quietly = TRUE))
  install.packages("pak", repos = "https://cloud.r-project.org/")
pak::pak("Nmoiroux/ecoXCorr")

Development version from Nmoiroux/ecoXCorr. Installs pak first if it is not already available.

Release

# enable cranapt (r2u) if it is not already set up, then install
grep -rqs r2u.stat.illinois.edu /etc/apt/sources.list /etc/apt/sources.list.d/ \
  || curl -fsSL https://raw.githubusercontent.com/eddelbuettel/r2u/master/inst/scripts/add_cranapt_noble.sh | sudo bash
sudo apt install -y r-cran-ecoxcorr

Fast Ubuntu binaries via r2u (no compilation). The cranapt setup runs once and is skipped when it is already enabled. We list this channel from recorded r2u download activity rather than from a live index of the repository, so treat it as last known rather than guaranteed.

bspm (used by r2u) also needs make: sudo apt install make

# enable the iucar/cran COPR if it is not already present, then install
ls /etc/yum.repos.d/*iucar*cran*.repo >/dev/null 2>&1 \
  || sudo dnf copr enable -y iucar/cran
sudo dnf install -y R-CRAN-ecoXCorr

RPMs from the iucar/cran COPR, rebuilt from CRAN.

For install.packages() integration in R, also: sudo dnf install R-CoprManager

# add the autoCRAN OBS repo (Tumbleweed) if it is missing, then install
zypper -q lr | grep -qi autoCRAN \
  || sudo zypper addrepo https://download.opensuse.org/repositories/devel:/languages:/R:/autoCRAN/openSUSE_Tumbleweed/devel:languages:R:autoCRAN.repo
sudo zypper install -y R-ecoXCorr

RPMs auto-built from CRAN on openSUSE OBS (Tumbleweed). We list this channel from recorded autoCRAN download activity rather than from a live index of the repository, so treat it as last known rather than guaranteed.

Health

CRAN checks

13OK

CRAN check page ↗

Slowest check: 3.6 min · r-oldrel-windows-x86_64

Status changes

OK13 OK2026-08-05
NOTE12 OK, 1 NOTE2026-08-01
OK13 OK2026-06-09
ERROR12 OK, 1 ERROR2026-06-08
OK7 OK2026-03-25

Advisories

none known

How this is measured·How advisories are found

Documentation

In release 0.2.2

READMEYes · 1,285 wordsVignettesNoNEWSYes · 100% structured · mentions 0.2.2Citation fileYes · software entry onlyWebsitenot declared in DESCRIPTION

Help pages: 8 (1 internal)includes a package overview page
Examples that run: 100%4 run in a plain check
Exported functions with examples: 80%
Documented parameters: 93%
Return-value docs: 100%
Help pages citing references: 38% with a bibliography file

How these are measured

Downloads

2.8K

CRAN downloads in the past year

Rank #14,404 · ~8/day · ~230/mo

Releases R versions

Daily download trend is not available in this view yet.

26830 days

83190 days

2.8K1 year

Compare downloads with other packages →

Also on64 r2u3 autocran

How downloads are counted

Repository

nmoiroux/ecoxcorr ↗Account: Nmoiroux

1Stars

0Forks

0Open issues

0Open PRs

13Releases

178Commits

1Commit identities

178 commits · Last activity 2026-05-01 · 0% stars, 30d

Responsiveness

How these are sampled

PRs merged (all time): 100%
Median days to close, 50 most recently updated closed issues: 0
Median days to close, 50 most recently updated closed PRs: 0

Stars over time

2026-04-17 · 12026-07-07 · 1

How these are measured

PracticesBeta

3 development-tooling and community-health practices detected across 3 families in the upstream repository

Checks run against github.com/nmoiroux/ecoxcorr on 2026-10-21.

Continuous integration (1)

GitHub Actions

Reproducibility and dev environment (1)

data-raw/

Research and citation (1)

CITATION.cff

How this is detected·Detection ruleset v4 (2026-10-20)

Dependencies

Declared dependencies

7 external dependencies (excludes base and recommended)

Installing ecoXCorr adds 83 packages (47 with compiled code, 86 MB of source tarballs). Heaviest: stringi 11 MB, ggplot2 6.0 MB, bslib 5.6 MB.

Depends (1)

R >= 3.5

Imports (7)

ggplot2 glmmTMB performance Rdpack scales shinystats

LinkingTo (0)

none

Suggests (1)

testthat

Enhances (0)

none

Dependencies facing archival

CRAN will archive these unless their check problems are fixed by the date shown. This package needs each one to install.

insight through performancefix by Nov 14

Dependency license breakdown →

Reverse dependencies

0direct

0indirect

Nothing depends on this yet.

How these are counted

Code & Tests

Datasets

People & History

People (3)

Nicolas Moiroux

Author, Maintainer since 0.1.9 (2026)

Colombine Bartholomée

Author

Paul Taconet

Author

Releases (3)

Pick two releases to compare their code metrics.

0.2.2Latest
record
2026-05-01 · current release · diff ↗
R
R 4.6.0 released · 2026-04-24
0.2.1
record
2026-04-01 · diff ↗
0.1.9
record
2026-03-24
R
R 4.5.0 released · 2025-04-11

Package metadata

First published: 2026-03-24
Total releases: 3 / 1 yrs
License: GPL (>= 3) OSI
Minimum R: ≥ 3.5
Bundled data: 14 KB / 2 files
Download size: 162 KB

Cite

Cite this package

Run in R for the authors' entry:

citation("ecoXCorr")

The package provides a citation file, so citation() returns the authors' own entry.

It points to 10.5281/zenodo.18600567.

The repository also keeps a CITATION.cff.

Cite the R Observatory

For a number measured here: a download total, a coverage figure, an archival date.

Format

APA

Balamuta, J. J. (2026). R Observatory: Metrics for ecoXCorr version 0.2.2 [Data set]. HJJB, LLC. Data release v2026-10-25. https://doi.org/10.5281/zenodo.21843040

From data release v2026-10-25, which the citation names so these numbers can be found later. More on citing and the projects behind them.

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