R Observatory: Metrics for dtametaTMB version 0.1.1

Balamuta, James Joseph

doi:10.5281/zenodo.21843040

dtametaTMB

0.1.1

Diagnostic Test Accuracy Meta-Analysis using Template Model Builder

0packages depend

301downloads / year

68.6%test coverage

13/13checks pass

Overview

About

Maintained by Claus NowakFirst published 2026-07-162 releasesCRAN page ↗GitHub ↗

Fits the hierarchical summary receiver operating characteristic (HSROC) model of Rutter and Gatsonis (2001) doi:10.1002/sim.942, the bivariate binomial-normal model of Reitsma et al. (2005) doi:10.1016/j.jclinepi.2005.02.022, the threshold-based bivariate time-to-event model of Hoyer et al. (2018) doi:10.1002/jrsm.1273, and the latent class extensions of Liu et al. (2015) doi:10.1111/biom.12264 for diagnostic studies without a perfect reference standard. Provides subgroup analyses, HSROC meta-regression, likelihood-ratio tests, summary ROC plots, and coupled forest plots.

Install

R (CRAN)pak (dev)Ubuntu (r2u)Fedora (COPR)openSUSE (OBS)

install.packages("dtametaTMB", repos = "https://cloud.r-project.org/")

Installs the current CRAN release. Prebuilt binaries on Windows and macOS.

if (!requireNamespace("pak", quietly = TRUE))
  install.packages("pak", repos = "https://cloud.r-project.org/")
pak::pak("EBME-UWK/dtametaTMB")

Development version from EBME-UWK/dtametaTMB. Installs pak first if it is not already available.

Release

# enable cranapt (r2u) if it is not already set up, then install
grep -rqs r2u.stat.illinois.edu /etc/apt/sources.list /etc/apt/sources.list.d/ \
  || curl -fsSL https://raw.githubusercontent.com/eddelbuettel/r2u/master/inst/scripts/add_cranapt_noble.sh | sudo bash
sudo apt install -y r-cran-dtametatmb

Fast Ubuntu binaries via r2u (no compilation). The cranapt setup runs once and is skipped when it is already enabled.

bspm (used by r2u) also needs make: sudo apt install make

# enable the iucar/cran COPR if it is not already present, then install
ls /etc/yum.repos.d/*iucar*cran*.repo >/dev/null 2>&1 \
  || sudo dnf copr enable -y iucar/cran
sudo dnf install -y R-CRAN-dtametaTMB

RPMs from the iucar/cran COPR, rebuilt from CRAN.

For install.packages() integration in R, also: sudo dnf install R-CoprManager

# add the autoCRAN OBS repo (Tumbleweed) if it is missing, then install
zypper -q lr | grep -qi autoCRAN \
  || sudo zypper addrepo https://download.opensuse.org/repositories/devel:/languages:/R:/autoCRAN/openSUSE_Tumbleweed/devel:languages:R:autoCRAN.repo
sudo zypper install -y R-dtametaTMB

RPMs auto-built from CRAN on openSUSE OBS (Tumbleweed).

Health

CRAN checks

13OK

Slowest check: 12.9 min · r-oldrel-windows-x86_64

Code health

Yes

Tests · ratio 0.54

68.6%

Coverage · measured lines

100%

Documentation · exports

5

Dependencies · direct

Check history

OK2026-08-05
13 OK · 0 NOTE · 0 WARNING · 0 ERROR · 0 FAILURE
NOTE2026-08-01
12 OK · 1 NOTE · 0 WARNING · 0 ERROR · 0 FAILURE
OK2026-07-17
6 OK · 0 NOTE · 0 WARNING · 0 ERROR · 0 FAILURE

Documentation

READMEYes · 149 wordsVignettesNopkgdown siteNoNEWSNoCode of conductNoContributing guideNo

Examples that run: 100%
Documented parameters: 100%
Return-value docs: 100%
References docs: 36%

Downloads

301

CRAN downloads in the past year

Rank #24,242 · ~1/day · ~25/mo

Releases R versions

Daily download trend is not available in this view yet.

30130 days

30190 days

3011 year

Compare downloads with other packages →

Also on20 r2u3 autocran

Repository

GitHub ↗ ebme-uwk/dtametatmb

0Stars

0Forks

0Open issues

0Open PRs

0Releases

License GPL-2.0 · Last activity 2026-08-04

Repository practices

Upstream repositoryBeta

Checks run against github.com/ebme-uwk/dtametatmb on 2026-08-09.

No development-tooling practices detected in the upstream repository.

How this is detected·Detection ruleset v1 (2026-07-18)

Dependencies

Declared dependencies

8 external dependencies (excludes base and recommended)

Depends (1)

R >= 3.5

Imports (5)

forestploter glmmTMBgridsurvivalTMB

LinkingTo (2)

RcppEigen TMB

Suggests (3)

knitr quarto testthat

Enhances (0)

none

Dependency license breakdown →

Reverse dependencies

0direct

0indirect

Nothing depends on this yet.

Code & Tests

Datasets

People & History

People (1)

Maintainer (1)

Claus Nowak

Author, Maintainer

Authors (1)

Claus Nowak

Author, Maintainer

Package Timeline

2 releases. Pick two to compare their code metrics. R releases are shown for context.

0.1.1Latest
2026-07-26 · current release · diff ↗
0.1.0
2026-07-16
R
R 4.6.0 released · 2026-04-24

Package metadata

First published: 2026-07-16
Total releases: 2 / 1 yrs
License: GPL (>= 2) OSI
Minimum R: ≥ 3.5
Bundled data: 9.7 KB / 8 files
Download size: not tracked yet
Installed size: not tracked yet
With dependencies: not tracked yet

Cite

Cite this package

Run in R for the authors' preferred citation:

citation("dtametaTMB")

Format

Nowak, C. (2026). dtametaTMB: Diagnostic Test Accuracy Meta-Analysis using Template Model Builder (Version 0.1.1) [Computer software]. https://doi.org/10.32614/CRAN.package.dtametaTMB

This is what citation() produces when a package has no citation file of its own. If it prints something else, use that.

Cite the R Observatory

For a number measured here: a download total, a coverage figure, an archival date.

Format

APA

Balamuta, J. J. (2026). R Observatory: Metrics for dtametaTMB version 0.1.1 [Data set]. HJJB, LLC. Data release v2026-08-15. https://doi.org/10.5281/zenodo.21843040

From data release v2026-08-15, which the citation names so these numbers can be found later. More on citing and the projects behind them.

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