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dbarts

Discrete Bayesian Additive Regression Trees Sampler

v0.9-33 · Mar 19, 2026 · GPL (>= 2)
CRAN GitHub Mirror

Description

Fits Bayesian additive regression trees (BART; Chipman, George, and McCulloch (2010) <doi:10.1214/09-AOAS285>) while allowing the updating of predictors or response so that BART can be incorporated as a conditional model in a Gibbs/Metropolis-Hastings sampler. Also serves as a drop-in replacement for package 'BayesTree'.

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CRAN Check Status

1 ERROR
6 NOTE
7 OK
Show all 14 flavors
Flavor Status
r-devel-linux-x86_64-debian-clang NOTE
r-devel-linux-x86_64-debian-gcc NOTE
r-devel-linux-x86_64-fedora-clang NOTE
r-devel-linux-x86_64-fedora-gcc NOTE
r-devel-macos-arm64 OK
r-devel-windows-x86_64 NOTE
r-oldrel-macos-arm64 OK
r-oldrel-macos-x86_64 OK
r-oldrel-windows-x86_64 ERROR
r-patched-linux-x86_64 NOTE
r-release-linux-x86_64 OK
r-release-macos-arm64 OK
r-release-macos-x86_64 OK
r-release-windows-x86_64 OK
Check details (7 non-OK)
NOTE r-devel-linux-x86_64-debian-clang

compiled code

File ‘dbarts/libs/dbarts.so’:
  Found non-API call to R: ‘R_UnboundValue’

Compiled code should not call non-API entry points in R.

See ‘Writing portable packages’ in the ‘Writing R Extensions’ manual,
and section ‘Moving into C API compliance’ for issues with the use of
non-API entry points.
NOTE r-devel-linux-x86_64-debian-gcc

compiled code

File ‘dbarts/libs/dbarts.so’:
  Found non-API call to R: ‘R_UnboundValue’

Compiled code should not call non-API entry points in R.

See ‘Writing portable packages’ in the ‘Writing R Extensions’ manual,
and section ‘Moving into C API compliance’ for issues with the use of
non-API entry points.
NOTE r-devel-linux-x86_64-fedora-clang

compiled code

File ‘dbarts/libs/dbarts.so’:
  Found non-API call to R: ‘R_UnboundValue’

Compiled code should not call non-API entry points in R.

See ‘Writing portable packages’ in the ‘Writing R Extensions’ manual,
and section ‘Moving into C API compliance’ for issues with the use of
non-API entry points.
NOTE r-devel-linux-x86_64-fedora-gcc

compiled code

File ‘dbarts/libs/dbarts.so’:
  Found non-API call to R: ‘R_UnboundValue’

Compiled code should not call non-API entry points in R.

See ‘Writing portable packages’ in the ‘Writing R Extensions’ manual,
and section ‘Moving into C API compliance’ for issues with the use of
non-API entry points.
NOTE r-devel-windows-x86_64

compiled code

File 'dbarts/libs/x64/dbarts.dll':
  Found non-API call to R: 'R_UnboundValue'

Compiled code should not call non-API entry points in R.

See 'Writing portable packages' in the 'Writing R Extensions' manual,
and section 'Moving into C API compliance' for issues with the use of
non-API entry points.
ERROR r-oldrel-windows-x86_64

re-building of vignette outputs

Error(s) in re-building vignettes:
--- re-building 'gibbs_sampler_mixture_model.Rmd' using rmarkdown
! Package pdftex.def Error: File `88e1f381b69f8b96e16b4c95c0dfc99cd2507662.pdf'
 not found: using draft setting.

Error: processing vignette 'gibbs_sampler_mixture_model.Rmd' failed with diagnostics:
LaTeX failed to compile D:/RCompile/CRANpkg/local/4.4/dbarts.Rcheck/vign_test/dbarts/vignettes/gibbs_sampler_mixture_model.tex. See https://yihui.org/tinytex/r/#debugging for debugging tips. See gibbs_sampler_mixture_model.log for more info.
--- failed re-building 'gibbs_sampler_mixture_model.Rmd'

--- re-building 'working_with_saved_trees.Rmd' using rmarkdown
! Package pdftex.def Error: File `5c5aea49af9aed9089ea5c84a6cdba7a57d7cc8c.pdf'
 not found: using draft setting.

Error: processing vignette 'working_with_saved_trees.Rmd' failed with diagnostics:
LaTeX failed to compile D:/RCompile/CRANpkg/local/4.4/dbarts.Rcheck/vign_test/dbarts/vignettes/working_with_saved_trees.tex. See https://yihui.org/tinytex/r/#debugging for debugging tips. See working_with_saved_trees.log for more info.
--- failed re-building 'working_with_saved_trees.Rmd'

SUMMARY: processing the following files failed:
  'gibbs_sampler_mixture_model.Rmd' 'working_with_saved_trees.Rmd'

Error: Vignette re-building failed.
Execution halted
NOTE r-patched-linux-x86_64

compiled code

File ‘dbarts/libs/dbarts.so’:
  Found non-API calls to R: ‘R_MissingArg’, ‘R_UnboundValue’

Compiled code should not call non-API entry points in R.

See ‘Writing portable packages’ in the ‘Writing R Extensions’ manual,
and section ‘Moving into C API compliance’ for issues with the use of
non-API entry points.

Additional Issues

rchk Details →

Check History

ERROR 11 OK · 2 NOTE · 0 WARNING · 1 ERROR · 0 FAILURE Mar 30, 2026
NOTE r-devel-linux-x86_64-debian-gcc

compiled code

File ‘dbarts/libs/dbarts.so’:
  Found non-API calls to R: ‘R_MissingArg’, ‘R_UnboundValue’

Compiled code should not call non-API entry points in R.

See ‘Writing portable packages’ in the ‘Writing R Extensions’ manual,
and section ‘Moving into C API compliance’ for issues with the use of
non-API entry points.
NOTE r-devel-linux-x86_64-fedora-clang

compiled code

File ‘dbarts/libs/dbarts.so’:
  Found non-API calls to R: ‘R_MissingArg’, ‘R_UnboundValue’

Compiled code should not call non-API entry points in R.

See ‘Writing portable packages’ in the ‘Writing R Extensions’ manual,
and section ‘Moving into C API compliance’ for issues with the use of
non-API entry points.
ERROR r-oldrel-windows-x86_64

re-building of vignette outputs

Error(s) in re-building vignettes:
--- re-building 'gibbs_sampler_mixture_model.Rmd' using rmarkdown
! Package pdftex.def Error: File `88e1f381b69f8b96e16b4c95c0dfc99cd2507662.pdf'
 not found: using draft setting.

Error: processing vignette 'gibbs_s
...[truncated]...
d_trees.log for more info.
--- failed re-building 'working_with_saved_trees.Rmd'

SUMMARY: processing the following files failed:
  'gibbs_sampler_mixture_model.Rmd' 'working_with_saved_trees.Rmd'

Error: Vignette re-building failed.
Execution halted
NOTE 13 OK · 1 NOTE · 0 WARNING · 0 ERROR · 0 FAILURE Mar 27, 2026
NOTE r-devel-linux-x86_64-debian-gcc

compiled code

File ‘dbarts/libs/dbarts.so’:
  Found non-API calls to R: ‘R_MissingArg’, ‘R_UnboundValue’

Compiled code should not call non-API entry points in R.

See ‘Writing portable packages’ in the ‘Writing R Extensions’ manual,
and section ‘Moving into C API compliance’ for issues with the use of
non-API entry points.
OK 14 OK · 0 NOTE · 0 WARNING · 0 ERROR · 0 FAILURE Mar 24, 2026
NOTE 13 OK · 1 NOTE · 0 WARNING · 0 ERROR · 0 FAILURE Mar 10, 2026
NOTE r-oldrel-macos-arm64

package vignettes

Package has ‘vignettes’ subdirectory but apparently no vignettes.
Perhaps the ‘VignetteBuilder’ information is missing from the
DESCRIPTION file?

Reverse Dependencies (21)

depends

stan4bart

imports

EBcoBART bartCause bartMan bartXViz glossa riAFTBART tidytreatment voi

linking_to

stan4bart

suggests

MatchIt WeightIt adrftools bundle butcher countSTAR insight marginaleffects mcmcsae tidyAML tmle twoStageDesignTMLE

Dependency Network

Dependencies Reverse dependencies stan4bart EBcoBART bartCause bartMan bartXViz glossa riAFTBART tidytreatment voi MatchIt WeightIt adrftools bundle butcher countSTAR +6 more reverse deps dbarts

Version History

updated 0.9-33 ← 0.9-32 diff Mar 20, 2026
new 0.9-32 Mar 10, 2026
updated 0.9-32 ← 0.9-30 diff Apr 1, 2025
updated 0.9-30 ← 0.9-28 diff Dec 2, 2024
updated 0.9-28 ← 0.9-26 diff May 1, 2024
updated 0.9-26 ← 0.9-25 diff Feb 3, 2024
updated 0.9-25 ← 0.9-23 diff Dec 6, 2023
updated 0.9-23 ← 0.9-22 diff Jan 22, 2023
updated 0.9-22 ← 0.9-20 diff Mar 28, 2022
updated 0.9-20 ← 0.9-19 diff Oct 7, 2021
updated 0.9-19 ← 0.9-18 diff Jan 4, 2021
updated 0.9-18 ← 0.9-17 diff Jun 11, 2020
updated 0.9-17 ← 0.9-16 diff Mar 19, 2020
updated 0.9-16 ← 0.9-13 diff Feb 18, 2020
updated 0.9-13 ← 0.9-12 diff Sep 23, 2019
updated 0.9-12 ← 0.9-11 diff May 24, 2019
updated 0.9-11 ← 0.9-8 diff Apr 19, 2019
updated 0.9-8 ← 0.9-7 diff Dec 18, 2018
updated 0.9-7 ← 0.9-5 diff Dec 17, 2018
updated 0.9-5 ← 0.9-4 diff Jul 6, 2018