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dartR.sexlinked

Analysing SNP Data to Identify Sex-Linked Markers

v1.2.2 · Mar 20, 2026 · GPL (>= 3)

Description

Identifies, filters and exports sex linked markers using 'SNP' (single nucleotide polymorphism) data. To install the other packages, we recommend to install the 'dartRverse' package, that supports the installation of all packages in the 'dartRverse'. If you want understand the applied rational to identify sexlinked markers and/or want to cite 'dartR.sexlinked', you find the information by typing citation('dartR.sexlinked') in the console.

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CRAN Check Status

2 ERROR
12 OK
Show all 14 flavors
Flavor Status
r-devel-linux-x86_64-debian-clang OK
r-devel-linux-x86_64-debian-gcc OK
r-devel-linux-x86_64-fedora-clang OK
r-devel-linux-x86_64-fedora-gcc OK
r-devel-macos-arm64 OK
r-devel-windows-x86_64 OK
r-oldrel-macos-arm64 ERROR
r-oldrel-macos-x86_64 OK
r-oldrel-windows-x86_64 OK
r-patched-linux-x86_64 OK
r-release-linux-x86_64 OK
r-release-macos-arm64 ERROR
r-release-macos-x86_64 OK
r-release-windows-x86_64 OK
Check details (2 non-OK)
ERROR r-oldrel-macos-arm64

whether package can be installed

Installation failed.
See ‘/Volumes/Builds/packages/big-sur-arm64/results/4.4/dartR.sexlinked.Rcheck/00install.out’ for details.
ERROR r-release-macos-arm64

whether package can be installed

Installation failed.
See ‘/Volumes/Builds/packages/big-sur-arm64/results/4.5/dartR.sexlinked.Rcheck/00install.out’ for details.

Check History

ERROR 9 OK · 0 NOTE · 4 WARNING · 1 ERROR · 0 FAILURE Mar 20, 2026
WARNING r-devel-linux-x86_64-debian-clang

whether package can be installed

Found the following significant warnings:
  Warning: replacing previous import ‘adegenet::glMean’ by ‘dartR.base::glMean’ when loading ‘dartR.sexlinked’
  Warning: replacing previous import ‘adegenet::glSum’ by ‘dartR.base::glSum’ when loading ‘dartR.sexlinked’
See ‘/home/hornik/tmp/R.check/r-devel-clang/Work/PKGS/dartR.sexlinked.Rcheck/00install.out’ for details.
WARNING r-patched-linux-x86_64

whether package can be installed

Found the following significant warnings:
  Warning: replacing previous import ‘adegenet::glMean’ by ‘dartR.base::glMean’ when loading ‘dartR.sexlinked’
  Warning: replacing previous import ‘adegenet::glSum’ by ‘dartR.base::glSum’ when loading ‘dartR.sexlinked’
See ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/PKGS/dartR.sexlinked.Rcheck/00install.out’ for details.
WARNING r-release-linux-x86_64

whether package can be installed

Found the following significant warnings:
  Warning: replacing previous import ‘adegenet::glMean’ by ‘dartR.base::glMean’ when loading ‘dartR.sexlinked’
  Warning: replacing previous import ‘adegenet::glSum’ by ‘dartR.base::glSum’ when loading ‘dartR.sexlinked’
See ‘/home/hornik/tmp/R.check/r-release-gcc/Work/PKGS/dartR.sexlinked.Rcheck/00install.out’ for details.
WARNING r-release-windows-x86_64

whether package can be installed

Found the following significant warnings:
  Warning: replacing previous import 'adegenet::glMean' by 'dartR.base::glMean' when loading 'dartR.sexlinked'
  Warning: replacing previous import 'adegenet::glSum' by 'dartR.base::glSum' when loading 'dartR.sexlinked'
See 'd:/Rcompile/CRANpkg/local/4.5/dartR.sexlinked.Rcheck/00install.out' for details.
ERROR r-oldrel-macos-arm64

whether package can be installed

Installation failed.
See ‘/Volumes/Builds/packages/big-sur-arm64/results/4.4/dartR.sexlinked.Rcheck/00install.out’ for details.
WARNING 12 OK · 0 NOTE · 2 WARNING · 0 ERROR · 0 FAILURE Mar 12, 2026
WARNING r-devel-linux-x86_64-fedora-clang

whether package can be installed

Found the following significant warnings:
  Warning: replacing previous import ‘adegenet::glMean’ by ‘dartR.base::glMean’ when loading ‘dartR.sexlinked’
  Warning: replacing previous import ‘adegenet::glSum’ by ‘dartR.base::glSum’ when loading ‘dartR.sexlinked’
See ‘/data/gannet/ripley/R/packages/tests-clang/dartR.sexlinked.Rcheck/00install.out’ for details.
WARNING r-devel-linux-x86_64-fedora-gcc

whether package can be installed

Found the following significant warnings:
  Warning: replacing previous import ‘adegenet::glMean’ by ‘dartR.base::glMean’ when loading ‘dartR.sexlinked’
  Warning: replacing previous import ‘adegenet::glSum’ by ‘dartR.base::glSum’ when loading ‘dartR.sexlinked’
See ‘/data/gannet/ripley/R/packages/tests-devel/dartR.sexlinked.Rcheck/00install.out’ for details.
OK 14 OK · 0 NOTE · 0 WARNING · 0 ERROR · 0 FAILURE Mar 10, 2026

Dependency Network

Dependencies Reverse dependencies dartR.base dartR.data adegenet doParallel ggplot2 foreach patchwork dartR.sexlinked

Version History

updated 1.2.2 ← 1.0.5 diff Mar 20, 2026
new 1.0.5 Mar 10, 2026