R Observatory: Metrics for cvasi version 1.5.1

Balamuta, James Joseph

doi:10.5281/zenodo.21843040

cvasi

1.5.1

Calibration, Validation, and Simulation of TKTD Models

0packages depend

5.9Kdownloads / year

76.5%test coverage

13/13checks pass

Overview

About

Maintained by Nils KehreinFirst published 2024-05-029 releasesCRAN page ↗GitHub ↗

Eases the use of ecotoxicological effect models. Can simulate common toxicokinetic-toxicodynamic (TK/TD) models such as General Unified Threshold models of Survival (GUTS) and Lemna. It can derive effects and effect profiles (EPx) from scenarios. It supports the use of 'tidyr' workflows employing the pipe symbol. Time-consuming tasks can be parallelized.

Install

R (CRAN)pak (dev)Ubuntu (r2u)Fedora (COPR)openSUSE (OBS)

install.packages("cvasi", repos = "https://cloud.r-project.org/")

Installs the current CRAN release. Prebuilt binaries on Windows and macOS.

if (!requireNamespace("pak", quietly = TRUE))
  install.packages("pak", repos = "https://cloud.r-project.org/")
pak::pak("cvasi-tktd/cvasi")

Development version from cvasi-tktd/cvasi. Installs pak first if it is not already available.

Release

# enable cranapt (r2u) if it is not already set up, then install
grep -rqs r2u.stat.illinois.edu /etc/apt/sources.list /etc/apt/sources.list.d/ \
  || curl -fsSL https://raw.githubusercontent.com/eddelbuettel/r2u/master/inst/scripts/add_cranapt_noble.sh | sudo bash
sudo apt install -y r-cran-cvasi

Fast Ubuntu binaries via r2u (no compilation). The cranapt setup runs once and is skipped when it is already enabled.

bspm (used by r2u) also needs make: sudo apt install make

# enable the iucar/cran COPR if it is not already present, then install
ls /etc/yum.repos.d/*iucar*cran*.repo >/dev/null 2>&1 \
  || sudo dnf copr enable -y iucar/cran
sudo dnf install -y R-CRAN-cvasi

RPMs from the iucar/cran COPR, rebuilt from CRAN.

For install.packages() integration in R, also: sudo dnf install R-CoprManager

# add the autoCRAN OBS repo (Tumbleweed) if it is missing, then install
zypper -q lr | grep -qi autoCRAN \
  || sudo zypper addrepo https://download.opensuse.org/repositories/devel:/languages:/R:/autoCRAN/openSUSE_Tumbleweed/devel:languages:R:autoCRAN.repo
sudo zypper install -y R-cvasi

RPMs auto-built from CRAN on openSUSE OBS (Tumbleweed).

Health

CRAN checks

13OK

Slowest check: 8.1 min · r-oldrel-windows-x86_64

Code health

Yes

Tests · ratio 0.68

76.5%

Coverage · measured lines

99%

Documentation · exports

20

Dependencies · direct

Check history

OK2026-08-05
13 OK · 0 NOTE · 0 WARNING · 0 ERROR · 0 FAILURE
NOTE2026-08-01
12 OK · 1 NOTE · 0 WARNING · 0 ERROR · 0 FAILURE
OK2026-06-09
13 OK · 0 NOTE · 0 WARNING · 0 ERROR · 0 FAILURE
ERROR2026-06-08
12 OK · 0 NOTE · 0 WARNING · 1 ERROR · 0 FAILURE
OK2026-03-10
14 OK · 0 NOTE · 0 WARNING · 0 ERROR · 0 FAILURE

Documentation

READMEYes · 388 wordsVignettesYes · dynamicpkgdown siteNoNEWSYes · 100% structuredCode of conductNoContributing guideNo

Examples that run: 98%
Documented parameters: 100%
Return-value docs: 97%
References docs: 26%

Downloads

5.9K

CRAN downloads in the past year

Rank #7,228 · ~16/day · ~490/mo

Releases R versions

Daily download trend is not available in this view yet.

24630 days

1.2K90 days

5.9K1 year

Compare downloads with other packages →

Also on408 r2u36 autocran

Repository

GitHub ↗ cvasi-tktd/cvasi

5Stars

3Forks

0Open issues

3Open PRs

0Releases

190Commits

4Contributors

ecotoxicologymodelingsimulation

License GPL-3.0 · 190 commits · Last activity 2026-06-22 · 0% stars, 30d

Stars over time

2025-08-05 · 32026-07-07 · 5

Repository practices

Upstream repositoryBeta

6 development-tooling and community-health practices detected across 6 families in the upstream repository

Checks run against github.com/cvasi-tktd/cvasi on 2026-08-23.

Continuous integration (1)

GitHub Actions

Reproducibility and dev environment (1)

data-raw/

Docs source (1)

README.Rmd

Automation and maintenance (1)

Dependabot

Show all practices

Lint, format, editor (1)

RStudio project

Governance and community (1)

CODEOWNERS

How this is detected·Detection ruleset v1 (2026-07-18)

Dependencies

Declared dependencies

23 external dependencies (excludes base and recommended)

Depends (1)

R >= 3.5.0

Imports (20)

cli rlang stringr dplyr tibble purrr furrr tidyr magrittrutilsstatsmethodsgridgridExtra ggplot2 GGally deSolve lubridate units lifecycle

LinkingTo (0)

none

Suggests (7)

future knitr lemna rmarkdown roxyglobals testthat withr

Enhances (0)

none

Dependency license breakdown →

Reverse dependencies

0direct

0indirect

Nothing depends on this yet.

Code & Tests

Datasets

People & History

People (6)

Maintainer (1)

Nils Kehrein

Author, Maintainer

Authors (3)

Nils Kehrein

Author, Maintainer

Dirk Nickisch

Author

Peter Vermeiren

Author · added in 1.1.0

Contributors (3)

Andre Gergs

Contributor

Johannes Witt

Contributor

Torben Wittwer

Contributor · added in 1.1.0

Package Timeline

9 releases. Pick two to compare their code metrics. R releases are shown for context.

R
R 4.6.0 released · 2026-04-24
1.5.1Latest
2026-04-11 · current release · diff ↗
1.5.0
2025-09-11 · diff ↗
R
R 4.5.0 released · 2025-04-11
1.4.0
2025-02-28 · diff ↗
1.3.1
2024-11-22 · diff ↗
1.2.0
2024-09-23 · diff ↗
1.1.3
2024-07-25 · diff ↗
1.1.0
2024-05-30 · diff ↗
unarchivedReturned to CRAN
2024-05-30
archivedRemoved from CRAN
2024-05-14
NO issues were addressed on re-submission
0.10.5
2024-05-04 · diff ↗
0.10.4
2024-05-02
R
R 4.4.0 released · 2024-04-24

Package metadata

First published: 2024-05-02
Total releases: 9 / 2 yrs
License: GPL (>= 3) OSI
Minimum R: ≥ 3.5.0
Bundled data: 55 KB / 11 files
Download size: 663 KB
Installed size: not tracked yet
With dependencies: not tracked yet

Cite

Cite this package

Run in R for the authors' preferred citation:

citation("cvasi")

Format

Kehrein, N., Gergs, A., Nickisch, D., Vermeiren, P., Witt, J., & Wittwer, T. (2026). cvasi: Calibration, Validation, and Simulation of TKTD Models (Version 1.5.1) [Computer software]. https://doi.org/10.32614/CRAN.package.cvasi

This is what citation() produces when a package has no citation file of its own. If it prints something else, use that.

Cite the R Observatory

For a number measured here: a download total, a coverage figure, an archival date.

Format

APA

Balamuta, J. J. (2026). R Observatory: Metrics for cvasi version 1.5.1 [Data set]. HJJB, LLC. Data release v2026-08-25. https://doi.org/10.5281/zenodo.21843040

From data release v2026-08-25, which the citation names so these numbers can be found later. More on citing and the projects behind them.

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