R Observatory: Metrics for clustord version 2.0.1

Balamuta, James Joseph

doi:10.5281/zenodo.21843040

clustord

2.0.1Package record

Cluster Ordinal Data via Proportional Odds or Ordered Stereotype

0packages dependsuggested by 1

4.2Kdownloads / year

74.3%test coverage

13/13flavors OK

Overview

About

Maintained by Louise McMillanCRAN page ↗Website ↗

Biclustering, row clustering and column clustering using the proportional odds model (POM), ordered stereotype model (OSM) or binary model for ordinal categorical data. Fernández, D., Arnold, R., Pledger, S., Liu, I., & Costilla, R. (2019) doi:10.1007/s11634-018-0324-3.

Install

R (CRAN)Ubuntu (r2u)Fedora (COPR)openSUSE (OBS)

install.packages("clustord", repos = "https://cloud.r-project.org/")

Installs the current CRAN release. Prebuilt binaries on Windows and macOS.

Release

# enable cranapt (r2u) if it is not already set up, then install
grep -rqs r2u.stat.illinois.edu /etc/apt/sources.list /etc/apt/sources.list.d/ \
  || curl -fsSL https://raw.githubusercontent.com/eddelbuettel/r2u/master/inst/scripts/add_cranapt_noble.sh | sudo bash
sudo apt install -y r-cran-clustord

Fast Ubuntu binaries via r2u (no compilation). The cranapt setup runs once and is skipped when it is already enabled. We list this channel from recorded r2u download activity rather than from a live index of the repository, so treat it as last known rather than guaranteed.

bspm (used by r2u) also needs make: sudo apt install make

# enable the iucar/cran COPR if it is not already present, then install
ls /etc/yum.repos.d/*iucar*cran*.repo >/dev/null 2>&1 \
  || sudo dnf copr enable -y iucar/cran
sudo dnf install -y R-CRAN-clustord

RPMs from the iucar/cran COPR, rebuilt from CRAN.

For install.packages() integration in R, also: sudo dnf install R-CoprManager

# add the autoCRAN OBS repo (Tumbleweed) if it is missing, then install
zypper -q lr | grep -qi autoCRAN \
  || sudo zypper addrepo https://download.opensuse.org/repositories/devel:/languages:/R:/autoCRAN/openSUSE_Tumbleweed/devel:languages:R:autoCRAN.repo
sudo zypper install -y R-clustord

RPMs auto-built from CRAN on openSUSE OBS (Tumbleweed). We list this channel from recorded autoCRAN download activity rather than from a live index of the repository, so treat it as last known rather than guaranteed.

Health

CRAN checks

13OK

CRAN check page ↗

Slowest check: 8.0 min · r-devel-windows-x86_64

Status changes

OK13 OK2026-08-05
NOTE12 OK, 1 NOTE2026-08-01
OK12 OK2026-04-25
ERROR13 OK, 1 ERROR2026-03-30
OK14 OK2026-03-10

Advisories

none known

How this is measured·How advisories are found

Documentation

In release 2.0.1

READMEYes · 1,112 wordsVignettesYes · 6 · dynamicNEWSNoCitation fileYes · cites a publicationWebsiteYes · pkgdown

Help pages: 8 (1 internal)includes a package overview page
Examples that run: 100%3 run in a plain check
Exported functions with examples: 33%
Documented parameters: 100%
Return-value docs: 100%
Help pages citing references: 38%

Vignettes (6)

How these are measured

Downloads

4.2K

CRAN downloads in the past year

Rank #16,389 · ~11/day · ~349/mo

Releases R versions

Daily download trend is not available in this view yet.

30230 days

76490 days

4.2K1 year

Compare downloads with other packages →

Also on416 r2u6 autocran

How downloads are counted

Repository

vuw-clustering/clustord ↗Organization: vuw-clustering

2Stars

8Forks

12Open issues

1Open PRs

0Releases

315Commits

2Commit identities

315 commits · Last activity 2026-03-03

Responsiveness

How these are sampled

PRs merged (all time): 67%
Median days to close, 50 most recently updated closed issues: 103
Median days to close, 50 most recently updated closed PRs: 0

Stars over time

2024-11-12 · 22026-07-07 · 2

How these are measured

PracticesBeta

5 development-tooling and community-health practices detected across 2 families in the upstream repository

Checks run against github.com/vuw-clustering/clustord on 2026-10-22.

Continuous integration (2)

GitHub ActionsR CMD check workflow

The R CMD check workflow runs on Linux, macOS and Windows, and on R-devel

Docs source (3)

pkgdown

GitHub Pages site last deployed 2026-03-03 · The repository has a site deploy workflow

pkgdown site last built 2026-03-03

How this is detected·Detection ruleset v4 (2026-10-20)

Dependencies

Declared dependencies

9 external dependencies (excludes base and recommended)

Installing clustord adds 4 packages (3 with compiled code, 3.0 MB of source tarballs). Heaviest: Rcpp 1.8 MB, RcppArmadillo 1.0 MB, flexclust 167 KB.

Depends (3)

R >= 3.5.0statsutils

Imports (5)

RcppMASSnnetflexclustmethods

LinkingTo (2)

Rcpp RcppArmadillo

Suggests (6)

knitr formatR rmarkdown testthat multgeeparallel

Enhances (0)

none

Dependency license breakdown →

Reverse dependencies

0direct

0indirect

Suggested by 1

Suggests, most downloaded first

divoRce

How these are counted

Code & Tests

People & History

People (6)

Louise McMillan

Ying Cui

Author

Daniel Fernández Martínez

Author

Eleni Matechou

Author

B. D. Ripley

Contributor, Copyright holder

clustord osm regression functions and S3 methods derived by Louise McMillan from MASS package polr function by Venables…

W. N. Venables

Contributor, Copyright holder

clustord osm regression functions and S3 methods derived by Louise McMillan from MASS package polr function by Venables…

Releases (3)

Pick two releases to compare their code metrics.

R
R 4.6.0 released · 2026-04-24
2.0.1Latest
record
2026-03-03 · current release · diff ↗
2.0.0
record
2026-03-02 · diff ↗ ·
removed 4 exports
calc.SE.bicluster, calc.SE.rowcluster, calc.cluster.comparisons, mat2df

added 4 exports
calc_SE_bicluster, calc_SE_rowcluster, calc_cluster_comparisons, mat_to_df
1.3.4
record
2025-05-29
R
R 4.5.0 released · 2025-04-11

Package metadata

First published: 2025-05-29
Total releases: 3 / 1 yrs
License: GPL-3 OSI
Minimum R: ≥ 3.5.0
Download size: 1.8 MB

Cite

Cite this package

Run in R for the authors' preferred citation:

citation("clustord")

The package provides a citation file that builds its entry when R runs it. Run citation() to see it.

Cite the R Observatory

For a number measured here: a download total, a coverage figure, an archival date.

Format

APA

Balamuta, J. J. (2026). R Observatory: Metrics for clustord version 2.0.1 [Data set]. HJJB, LLC. Data release v2026-10-23. https://doi.org/10.5281/zenodo.21843040

From data release v2026-10-23, which the citation names so these numbers can be found later. More on citing and the projects behind them.

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