R Observatory: Metrics for clinfun version 1.1.6

Balamuta, James Joseph

doi:10.5281/zenodo.21843040

clinfun

1.1.6Package record

Clinical Trial Design and Data Analysis Functions

11packages dependsuggested by 5

32.1Kdownloads / year

–test coverage

13/13flavors OK

Overview

About

Maintained by Venkatraman E. SeshanCRAN page ↗

Utilities to make your clinical collaborations easier if not fun. It contains functions for designing studies such as Simon 2-stage and group sequential designs and for data analysis such as Jonckheere-Terpstra test and estimating survival quantiles.

Changes in 1.1.6

Issue in dwilcox call in jtpdf.f due to wilcox_free(); fortran code rewritten
Rd files for some functions updated
version on GitHub (12/06/2023) -

moved twostage.admissible call from print method to ph2simon; added reference

From NEWS.md in the release

Install

R (CRAN)Ubuntu (r2u)Fedora (COPR)openSUSE (OBS)

install.packages("clinfun", repos = "https://cloud.r-project.org/")

Installs the current CRAN release. Prebuilt binaries on Windows and macOS.

Release

# enable cranapt (r2u) if it is not already set up, then install
grep -rqs r2u.stat.illinois.edu /etc/apt/sources.list /etc/apt/sources.list.d/ \
  || curl -fsSL https://raw.githubusercontent.com/eddelbuettel/r2u/master/inst/scripts/add_cranapt_noble.sh | sudo bash
sudo apt install -y r-cran-clinfun

Fast Ubuntu binaries via r2u (no compilation). The cranapt setup runs once and is skipped when it is already enabled. We list this channel from recorded r2u download activity rather than from a live index of the repository, so treat it as last known rather than guaranteed.

bspm (used by r2u) also needs make: sudo apt install make

# enable the iucar/cran COPR if it is not already present, then install
ls /etc/yum.repos.d/*iucar*cran*.repo >/dev/null 2>&1 \
  || sudo dnf copr enable -y iucar/cran
sudo dnf install -y R-CRAN-clinfun

RPMs from the iucar/cran COPR, rebuilt from CRAN.

For install.packages() integration in R, also: sudo dnf install R-CoprManager

# add the autoCRAN OBS repo (Tumbleweed) if it is missing, then install
zypper -q lr | grep -qi autoCRAN \
  || sudo zypper addrepo https://download.opensuse.org/repositories/devel:/languages:/R:/autoCRAN/openSUSE_Tumbleweed/devel:languages:R:autoCRAN.repo
sudo zypper install -y R-clinfun

RPMs auto-built from CRAN on openSUSE OBS (Tumbleweed). We list this channel from recorded autoCRAN download activity rather than from a live index of the repository, so treat it as last known rather than guaranteed.

Health

CRAN checks

13OK

CRAN check page ↗

Slowest check: 2.8 min · r-devel-windows-x86_64

Status changes

OK13 OK2026-08-05
NOTE12 OK, 1 NOTE2026-08-01
OK14 OK2026-03-10

Advisories

none known

How this is measured·How advisories are found

Documentation

In release 1.1.6

READMENoVignettesYes · 1 · dynamicNEWSYes · 100% structured · mentions 1.1.6Citation fileNoWebsitenot declared in DESCRIPTION

Help pages: 24 (1 internal)
Examples that run: 76%13 run in a plain check · 4 never run
Exported functions with examples: 76%
Documented parameters: 90%
Return-value docs: 76%
Help pages citing references: 71%

Vignettes (1)

Functions For Clinical Trial Design HTML

How these are measured

Downloads

32.1K

CRAN downloads in the past year

Rank #1,988 · ~88/day · ~2.7K/mo

Releases R versions

Daily download trend is not available in this view yet.

3.8K30 days

9.3K90 days

32.1K1 year

Compare downloads with other packages →

Also on569 r2u15 autocran5.2K conda_forge192 bioconda133 c2d4u

How downloads are counted

Dependencies

Declared dependencies

3 external dependencies (excludes base and recommended)

Installing clinfun adds 1 package (1 with compiled code, 1.0 MB of source tarballs). Heaviest: mvtnorm 1.0 MB.

Depends (3)

R >= 3.0.0graphicsstats

Imports (1)

mvtnorm

LinkingTo (0)

none

Suggests (3)

knitr rmarkdownsurvival

Enhances (0)

none

Dependency license breakdown →

Reverse dependencies

11direct

0indirect

Depends 7 · Imports 4

Suggested by 5

Show all 16 packagesHide all 16 packages

Depends, Imports or LinkingTo, most downloaded first

DACT binseqtest rocbc p2oncology EasyDescribe gMWT ph2mult clinical gen2stage hctrial frequentistSSDBinary

Suggests, most downloaded first

RcmdrPlugin.EZR VisualizeSimon2Stage ADCT EDI UnplanSimon

How these are counted

Code & Tests

Datasets

People & History

People (2)

Venkatraman E. Seshan

Author, Maintainer · added in 0.7-4

Karissa Whiting

Author · added in 1.1.0

Maintainer since 0.7-0 (2007)

Listed in earlier versions (1)

E. S. Venkatraman

no longer listed · 0.7-0 to 0.7-3

Releases (47)

Pick two releases to compare their code metrics.

1.1.6Latest
record
2026-08-29 · current release · diff ↗
R
R 4.6.0 released · 2026-04-24
R
R 4.5.0 released · 2025-04-11
R
R 4.4.0 released · 2024-04-24
1.1.5
record
2023-10-19 · diff ↗
1.1.4
record
2023-10-12 · diff ↗
1.1.3
record
2023-07-13 · diff ↗
1.1.2
record
2023-06-19 · diff ↗
R
R 4.3.0 released · 2023-04-21
1.1.1
record
2023-03-07 · diff ↗
R
R 4.2.0 released · 2022-04-22
1.1.0
record
2022-02-23 · diff ↗ ·
added 2 exports
twostage.admissible, futilbdry
R
R 4.1.0 released · 2021-05-18
R
R 4.0.0 released · 2020-04-24
R
R 3.6.0 released · 2019-04-26
R
R 3.5.0 released · 2018-04-23

Show 57 earlier eventsHide 57 earlier events

1.0.15
record
2018-04-13 · diff ↗ ·
added 1 export
deltaAUC
1.0.14
record
2017-04-26 · diff ↗
R
R 3.4.0 released · 2017-04-21
1.0.13
record
2016-11-30 · diff ↗
1.0.12
record
2016-10-17 · diff ↗ ·
added 1 export
aucVardiTest
R
R 3.3.0 released · 2016-05-03
1.0.11
record
2015-08-12 · diff ↗
1.0.10
record
2015-05-18 · diff ↗
R
R 3.2.0 released · 2015-04-16
1.0.9
record
2015-02-24 · diff ↗ ·
added 1 export
mdrr
1.0.6
record
2014-07-22 · diff ↗
R
R 3.1.0 released · 2014-04-10
1.0.5
record
2013-04-16 · diff ↗
R
R 3.0.0 released · 2013-04-03
1.0.4
record
2013-01-23 · diff ↗
1.0.3
record
2012-10-15 · diff ↗
1.0.2
record
2012-09-26 · diff ↗
1.0.1
record
2012-08-14 · diff ↗
R
R 2.15.0 released · 2012-03-30
1.0.0
record
2012-03-13 · diff ↗
0.9.9
record
2012-01-18 · diff ↗ ·
added 1 export
coxphERR
R
R 2.14.0 released · 2011-10-31
0.9.8
record
2011-09-14 · diff ↗
0.9.7
record
2011-04-27 · diff ↗
R
R 2.13.0 released · 2011-04-13
0.9.6
record
2011-03-24 · diff ↗
0.9.5
record
2011-03-09 · diff ↗
0.9.4
record
2011-02-25 · diff ↗ ·
added 1 export
twostage.inference
0.9.3
record
2010-12-07 · diff ↗
0.9.2
record
2010-11-10 · diff ↗ ·
added 1 export
roc.curve
0.9.1
record
2010-11-05 · diff ↗ ·
added 2 exports
roc.area.test, roc.perm.test
0.9.0
record
2010-11-03 · diff ↗
R
R 2.12.0 released · 2010-10-15
R
R 2.11.0 released · 2010-04-22
0.8.10
record
2010-04-16 · diff ↗
0.8.9
record
2010-04-10 · diff ↗
0.8.8
record
2010-04-08 · diff ↗ ·
added 1 export
or2pcase
0.8.7
record
2009-11-22 · diff ↗
0.8.6
record
2009-11-19 · diff ↗
R
R 2.10.0 released · 2009-10-26
0.8.5
record
2009-07-18 · diff ↗
R
R 2.9.0 released · 2009-04-17
0.8.4
record
2008-12-04 · diff ↗
0.8.3
record
2008-11-18 · diff ↗
R
R 2.8.0 released · 2008-10-20
0.8.2
record
2008-07-05 · diff ↗
0.8.1
record
2008-06-18 · diff ↗
0.8.0
record
2008-05-25 · diff ↗ ·
added 1 export
power.ladesign
0.7-5
record
2008-05-13 · diff ↗
R
R 2.7.0 released · 2008-04-22
0.7-4
record
2007-10-07 · diff ↗
R
R 2.6.0 released · 2007-10-03
0.7-3
record
2007-05-11 · diff ↗ ·
added 1 export
calogrank
R
R 2.5.0 released · 2007-04-24
0.7-1
record
2007-02-28 · diff ↗ ·
added 2 exports
jonckheere.test, bdrycross.prob
0.7-0
record
2007-02-25
R
R 2.4.0 released · 2006-10-03

Package metadata

First published: 2007-02-25
Total releases: 47 / 19 yrs
License: GPL (>= 2) OSI
Minimum R: ≥ 3.0.0
Bundled data: 1.0 KB / 1 file
Download size: 85 KB

Appears in task views

Clinical Trial Design, Monitoring, Analysis and Reporting Survival Analysis

Cite

Cite this package

Run in R for the authors' preferred citation:

citation("clinfun")

Format

Seshan, V. E., & Whiting, K. (2026). clinfun: Clinical Trial Design and Data Analysis Functions (Version 1.1.6) [Computer software]. https://doi.org/10.32614/CRAN.package.clinfun

This package has no citation file, so citation() returns this entry built from DESCRIPTION.

Cite the R Observatory

For a number measured here: a download total, a coverage figure, an archival date.

Format

APA

Balamuta, J. J. (2026). R Observatory: Metrics for clinfun version 1.1.6 [Data set]. HJJB, LLC. Data release v2026-10-22. https://doi.org/10.5281/zenodo.21843040

From data release v2026-10-22, which the citation names so these numbers can be found later. More on citing and the projects behind them.

Report a problem with this page →