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clampSeg

Idealisation of Patch Clamp Recordings

v1.2-0 · Jun 27, 2025 · GPL-3

Description

Implements the model-free multiscale idealisation approaches: Jump-Segmentation by MUltiResolution Filter (JSMURF), Hotz et al. (2013) <doi:10.1109/TNB.2013.2284063>, JUmp Local dEconvolution Segmentation filter (JULES), Pein et al. (2018) <doi:10.1109/TNB.2018.2845126>, and Heterogeneous Idealization by Local testing and DEconvolution (HILDE), Pein et al. (2021) <doi:10.1109/TNB.2020.3031202>. Further details on how to use them are given in the accompanying vignette.

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CRAN Check Status

4 WARNING
10 OK
Show all 14 flavors
Flavor Status
r-devel-linux-x86_64-debian-clang WARNING
r-devel-linux-x86_64-debian-gcc WARNING
r-devel-linux-x86_64-fedora-clang OK
r-devel-linux-x86_64-fedora-gcc OK
r-devel-macos-arm64 OK
r-devel-windows-x86_64 OK
r-oldrel-macos-arm64 OK
r-oldrel-macos-x86_64 OK
r-oldrel-windows-x86_64 OK
r-patched-linux-x86_64 WARNING
r-release-linux-x86_64 WARNING
r-release-macos-arm64 OK
r-release-macos-x86_64 OK
r-release-windows-x86_64 OK
Check details (4 non-OK)
WARNING r-devel-linux-x86_64-debian-clang

sizes of PDF files under ‘inst/doc’

‘gs+qpdf’ made some significant size reductions:
     compacted ‘Vignette.pdf’ from 1440Kb to 243Kb
  consider running tools::compactPDF(gs_quality = "ebook") on these files,
  or build the source package with --compact-vignettes=both
WARNING r-devel-linux-x86_64-debian-gcc

sizes of PDF files under ‘inst/doc’

‘gs+qpdf’ made some significant size reductions:
     compacted ‘Vignette.pdf’ from 1440Kb to 243Kb
  consider running tools::compactPDF(gs_quality = "ebook") on these files,
  or build the source package with --compact-vignettes=both
WARNING r-patched-linux-x86_64

sizes of PDF files under ‘inst/doc’

‘gs+qpdf’ made some significant size reductions:
     compacted ‘Vignette.pdf’ from 1440Kb to 243Kb
  consider running tools::compactPDF(gs_quality = "ebook") on these files,
  or build the source package with --compact-vignettes=both
WARNING r-release-linux-x86_64

sizes of PDF files under ‘inst/doc’

‘gs+qpdf’ made some significant size reductions:
     compacted ‘Vignette.pdf’ from 1440Kb to 243Kb
  consider running tools::compactPDF(gs_quality = "ebook") on these files,
  or build the source package with --compact-vignettes=both

Check History

WARNING 13 OK · 0 NOTE · 1 WARNING · 0 ERROR · 0 FAILURE Mar 28, 2026
WARNING r-devel-linux-x86_64-debian-gcc

sizes of PDF files under ‘inst/doc’

‘gs+qpdf’ made some significant size reductions:
     compacted ‘Vignette.pdf’ from 1440Kb to 243Kb
  consider running tools::compactPDF(gs_quality = "ebook") on these files,
  or build the source package with --compact-vignettes=both
OK 14 OK · 0 NOTE · 0 WARNING · 0 ERROR · 0 FAILURE Mar 10, 2026

Dependency Network

Dependencies Reverse dependencies stepR lowpassFilter clampSeg

Version History

new 1.2-0 Mar 10, 2026
updated 1.2-0 ← 1.1-1 diff Jun 26, 2025
updated 1.1-1 ← 1.1-0 diff Jan 27, 2022
updated 1.1-0 ← 1.0-5 diff Aug 24, 2020
updated 1.0-5 ← 1.0-4 diff Nov 4, 2019
updated 1.0-4 ← 1.0-3 diff May 24, 2018
updated 1.0-3 ← 1.0-1 diff Apr 11, 2018
new 1.0-1 Jun 6, 2017