R Observatory: Metrics for cgmquantify version 0.1.0

Balamuta, James Joseph

doi:10.5281/zenodo.21843040

cgmquantify

0.1.0

Analyzing Glucose and Glucose Variability

0packages depend

2.9Kdownloads / year

0.0%test coverage

11/13checks pass

Overview

About

Maintained by Maria HenriquezFirst published 2021-02-051 releasesCRAN page ↗

Continuous glucose monitoring (CGM) systems provide real-time, dynamic glucose information by tracking interstitial glucose values throughout the day. Glycemic variability, also known as glucose variability, is an established risk factor for hypoglycemia (Kovatchev) and has been shown to be a risk factor in diabetes complications. Over 20 metrics of glycemic variability have been identified. Here, we provide functions to calculate glucose summary metrics, glucose variability metrics (as defined in clinical publications), and visualizations to visualize trends in CGM data. Cho P, Bent B, Wittmann A, et al. (2020) https://diabetes.diabetesjournals.org/content/69/Supplement_1/73-LB.abstract American Diabetes Association (2020) https://professional.diabetes.org/diapro/glucose_calc Kovatchev B (2019) doi:10.1177/1932296819826111 Kovdeatchev BP (2017) doi:10.1038/nrendo.2017.3 Tamborlane W V., Beck RW, Bode BW, et al. (2008) doi:10.1056/NEJMoa0805017 Umpierrez GE, P. Kovatchev B (2018) doi:10.1016/j.amjms.2018.09.010.

Install

R (CRAN)Ubuntu (r2u)Fedora (COPR)openSUSE (OBS)

install.packages("cgmquantify", repos = "https://cloud.r-project.org/")

Installs the current CRAN release. Prebuilt binaries on Windows and macOS.

Release

# enable cranapt (r2u) if it is not already set up, then install
grep -rqs r2u.stat.illinois.edu /etc/apt/sources.list /etc/apt/sources.list.d/ \
  || curl -fsSL https://raw.githubusercontent.com/eddelbuettel/r2u/master/inst/scripts/add_cranapt_noble.sh | sudo bash
sudo apt install -y r-cran-cgmquantify

Fast Ubuntu binaries via r2u (no compilation). The cranapt setup runs once and is skipped when it is already enabled.

bspm (used by r2u) also needs make: sudo apt install make

# enable the iucar/cran COPR if it is not already present, then install
ls /etc/yum.repos.d/*iucar*cran*.repo >/dev/null 2>&1 \
  || sudo dnf copr enable -y iucar/cran
sudo dnf install -y R-CRAN-cgmquantify

RPMs from the iucar/cran COPR, rebuilt from CRAN.

For install.packages() integration in R, also: sudo dnf install R-CoprManager

# add the autoCRAN OBS repo (Tumbleweed) if it is missing, then install
zypper -q lr | grep -qi autoCRAN \
  || sudo zypper addrepo https://download.opensuse.org/repositories/devel:/languages:/R:/autoCRAN/openSUSE_Tumbleweed/devel:languages:R:autoCRAN.repo
sudo zypper install -y R-cgmquantify

RPMs auto-built from CRAN on openSUSE OBS (Tumbleweed).

Health

CRAN checks

2NOTE11OK

Failing flavors

NOTE r-devel-linux-x86_64-fedora-clang
NOTE r-devel-linux-x86_64-fedora-gcc

Slowest check: 1.3 min · r-oldrel-windows-x86_64

Code health

Yes

Tests · ratio 5.21

0.0%

Coverage · measured lines

100%

Documentation · exports

6

Dependencies · direct

Check history

NOTE2026-06-09
11 OK · 2 NOTE · 0 WARNING · 0 ERROR · 0 FAILURE
ERROR2026-06-08
10 OK · 2 NOTE · 0 WARNING · 1 ERROR · 0 FAILURE
NOTE2026-03-10
9 OK · 5 NOTE · 0 WARNING · 0 ERROR · 0 FAILURE

Documentation

READMEYes · 124 wordsVignettesYes · dynamicpkgdown siteNoNEWSNoCode of conductNoContributing guideNo

Examples that run: 94%
Documented parameters: 100%
Return-value docs: 100%
References docs: 0%

Downloads

2.9K

CRAN downloads in the past year

Rank #14,978 · ~8/day · ~238/mo

Releases R versions

Daily download trend is not available in this view yet.

19130 days

69690 days

2.9K1 year

Compare downloads with other packages →

Also on109 r2u10 autocran

Dependencies

Declared dependencies

8 external dependencies (excludes base and recommended)

Depends (1)

R >= 2.10

Imports (6)

dplyr tidyverse ggplot2 hmsstatsmagrittr

LinkingTo (0)

none

Suggests (3)

testthat knitr rmarkdown

Enhances (0)

none

Dependency license breakdown →

Reverse dependencies

0direct

0indirect

Nothing depends on this yet.

Code & Tests

People & History

People (2)

Maintainer (1)

Maria Henriquez

Author, Compiler, Copyright holder, Maintainer, Translator

Authors (2)

Maria Henriquez

Author, Compiler, Copyright holder, Maintainer, Translator

Brinnae Bent

Author, Copyright holder, Data contributor

Copyright holders (2)

Maria Henriquez

Author, Compiler, Copyright holder, Maintainer, Translator

Brinnae Bent

Author, Copyright holder, Data contributor

Translators (1)

Maria Henriquez

Author, Compiler, Copyright holder, Maintainer, Translator

Package Timeline

1 release. R releases are shown for context.

R
R 4.6.0 released · 2026-04-24
0.1.0Latest
2026-03-10 · current release
R
R 4.5.0 released · 2025-04-11

Package metadata

First published: 2021-02-05
Total releases: 1 / 5 yrs
License: MIT License + file LICENSE OSI
Minimum R: ≥ 2.10
Download size: 45 KB
Installed size: not tracked yet
With dependencies: not tracked yet

Cite

Cite this package

Run in R for the authors' preferred citation:

citation("cgmquantify")

Format

Henriquez, M., & Bent, B. (2021). cgmquantify: Analyzing Glucose and Glucose Variability (Version 0.1.0) [Computer software]. https://doi.org/10.32614/CRAN.package.cgmquantify

This is what citation() produces when a package has no citation file of its own. If it prints something else, use that.

Cite the R Observatory

For a number measured here: a download total, a coverage figure, an archival date.

Format

APA

Balamuta, J. J. (2026). R Observatory: Metrics for cgmquantify version 0.1.0 [Data set]. HJJB, LLC. Data release v2026-08-15. https://doi.org/10.5281/zenodo.21843040

From data release v2026-08-15, which the citation names so these numbers can be found later. More on citing and the projects behind them.

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