R Observatory: Metrics for cTMed version 1.0.10

Balamuta, James Joseph

doi:10.5281/zenodo.21843040

cTMed

1.0.10Package record

Continuous-Time Mediation

0packages depend

3Kdownloads / year

99.7%test coverage

13/13flavors OK

Overview

About

Maintained by Ivan Jacob Agaloos PesiganCRAN page ↗GitHub ↗Website ↗Issues ↗

Computes effect sizes, standard errors, and confidence intervals for total, direct, and indirect effects in continuous-time mediation models as described in Pesigan, Russell, and Chow (2025) doi:10.1037/met0000779.

Changes in 1.0.10

Patch

Added standardized centrality measures.
Allow diagonal sigma in
DeltaBetaStd(),
DeltaMedStd(),
DeltaTotalCentralStd(),
DeltaDirectCentralStd(),
DeltaIndirectCentralStd(),
MCBetaStd(),
MCMedStd(),
MCTotalCentralStd(),
MCDirectCentralStd(), and

Show all changes in 1.0.10Hide the rest of the changes in 1.0.10

MCIndirectCentralStd().

From NEWS.md in the release

Install

R (CRAN)pak (dev)Ubuntu (r2u)Fedora (COPR)openSUSE (OBS)

install.packages("cTMed", repos = "https://cloud.r-project.org/")

Installs the current CRAN release. Prebuilt binaries on Windows and macOS.

if (!requireNamespace("pak", quietly = TRUE))
  install.packages("pak", repos = "https://cloud.r-project.org/")
pak::pak("jeksterslab/cTMed")

Development version from jeksterslab/cTMed. Installs pak first if it is not already available.

Release

# enable cranapt (r2u) if it is not already set up, then install
grep -rqs r2u.stat.illinois.edu /etc/apt/sources.list /etc/apt/sources.list.d/ \
  || curl -fsSL https://raw.githubusercontent.com/eddelbuettel/r2u/master/inst/scripts/add_cranapt_noble.sh | sudo bash
sudo apt install -y r-cran-ctmed

Fast Ubuntu binaries via r2u (no compilation). The cranapt setup runs once and is skipped when it is already enabled. We list this channel from recorded r2u download activity rather than from a live index of the repository, so treat it as last known rather than guaranteed.

bspm (used by r2u) also needs make: sudo apt install make

# enable the iucar/cran COPR if it is not already present, then install
ls /etc/yum.repos.d/*iucar*cran*.repo >/dev/null 2>&1 \
  || sudo dnf copr enable -y iucar/cran
sudo dnf install -y R-CRAN-cTMed

RPMs from the iucar/cran COPR, rebuilt from CRAN.

For install.packages() integration in R, also: sudo dnf install R-CoprManager

# add the autoCRAN OBS repo (Tumbleweed) if it is missing, then install
zypper -q lr | grep -qi autoCRAN \
  || sudo zypper addrepo https://download.opensuse.org/repositories/devel:/languages:/R:/autoCRAN/openSUSE_Tumbleweed/devel:languages:R:autoCRAN.repo
sudo zypper install -y R-cTMed

RPMs auto-built from CRAN on openSUSE OBS (Tumbleweed). We list this channel from recorded autoCRAN download activity rather than from a live index of the repository, so treat it as last known rather than guaranteed.

Health

CRAN checks

13OK

CRAN check page ↗

Slowest check: 4.8 min · r-devel-windows-x86_64

Status changes

OK13 OK2026-08-05
NOTE12 OK, 1 NOTE2026-08-01
OK14 OK2026-04-22
ERROR13 OK, 1 ERROR2026-04-18
OK14 OK2026-03-10

Advisories

none known

How this is measured·How advisories are found

Documentation

In release 1.0.10

README· In the repository, left out of the releaseVignettes· In the repository, left out of the releaseNEWSYes · 100% structured · mentions 1.0.10Citation fileYes · cites a publicationWebsiteYes

Help pages: 79 (1 internal)includes a package overview page
Examples that run: 82%63 run in a plain check · 14 never run
Exported functions with examples: 100%
Documented parameters: 100%
Return-value docs: 100%
Help pages citing references: 62%

How these are measured

Downloads

3K

CRAN downloads in the past year

Rank #12,785 · ~8/day · ~249/mo

Releases R versions

Daily download trend is not available in this view yet.

29730 days

88890 days

3K1 year

Compare downloads with other packages →

Also on1.2K r2u8 autocran

How downloads are counted

Repository

jeksterslab/ctmed ↗Account: jeksterslab

1Stars

0Forks

1Open issues

0Open PRs

10Releases

276Commits

2Commit identities

continuous-timedelta-methodmediationmonte-carlo-methodrr-packagecentralitynetwork

License file reads as GPL-3.0 · 276 commits · Last activity 2026-09-18

Responsiveness

not measured

Stars over time

2025-09-13 · 12026-07-07 · 1

How these are measured

PracticesBeta

10 development-tooling and community-health practices detected across 6 families in the upstream repository

Checks run against github.com/jeksterslab/ctmed on 2026-10-21.

Continuous integration (2)

GitHub ActionsR CMD check workflow

The R CMD check workflow runs on Linux, macOS and Windows, and on R-devel

Docs source (2)

GitHub Pages site last deployed 2026-09-18 · The repository has a site deploy workflow

Coverage (1)

Coverage reporting

Reproducibility and dev environment (2)

MakefileDev Container

Show all practicesHide 2 practices

Research and citation (1)

CITATION.cff

Lint, format, editor (2)

Lint workflowRStudio project

How this is detected·Detection ruleset v4 (2026-10-20)

Dependencies

Declared dependencies

12 external dependencies (excludes base and recommended)

Installing cTMed adds 4 packages (3 with compiled code, 2.9 MB of source tarballs). Heaviest: Rcpp 1.8 MB, RcppArmadillo 1.0 MB, simStateSpace 75 KB.

Depends (1)

R >= 3.5.0

Imports (4)

Rcpp numDerivparallelsimStateSpace

LinkingTo (2)

Rcpp RcppArmadillo

Suggests (7)

knitr rmarkdown testthat expm dynr betaDelta bootStateSpace

Enhances (0)

none

Dependency license breakdown →

Reverse dependencies

0direct

0indirect

Nothing depends on this yet.

How these are counted

Code & Tests

People & History

People (3)

Ivan Jacob Agaloos Pesigan

Sy-Miin Chow

Contributor · added in 1.0.8

Michael A. Russell

Contributor · added in 1.0.8

Releases (10)

Pick two releases to compare their code metrics.

1.0.10Latest
record
2026-07-21 · current release · diff ↗ ·
added 22 exports
BootDirectCentral, BootDirectCentralStd, BootIndirectCentralStd, BootTotalCentralStd, DeltaDirectCentral, DeltaDirectCentralStd, DeltaIndirectCentralStd, DeltaTotalCentralStd, DirectCentral, DirectCentralStd, IndirectCentralStd, MCDirectCentral, MCDirectCentralStd, MCIndirectCentralStd, MCTotalCentralStd, PosteriorBetaStd, PosteriorDirectCentral, PosteriorDirectCentralStd, PosteriorIndirectCentralStd, PosteriorMedStd, PosteriorTotalCentralStd, TotalCentralStd
R
R 4.6.0 released · 2026-04-24
1.0.9
record
2026-02-05 · diff ↗
1.0.8
record
2025-10-13 · diff ↗
1.0.7
record
2025-10-02 · diff ↗
R
R 4.5.0 released · 2025-04-11
1.0.6
record
2025-02-21 · diff ↗ ·
removed 2 exports
ExpCov, ExpMean
1.0.5
record
2025-01-24 · diff ↗ ·
added 3 exports
BootIndirectCentral, BootTotalCentral, MCPhiSigma
1.0.4
record
2025-01-08 · diff ↗ ·
added 4 exports
BootBeta, BootBetaStd, BootMed, BootMedStd
1.0.3
record
2024-12-16 · diff ↗ ·
removed 1 export
PosteriorPhi
1.0.2
record
2024-11-26 · diff ↗ ·
added 10 exports
DeltaBetaStd, DeltaMedStd, DirectStd, ExpCov, ExpMean, IndirectStd, MCBetaStd, MCMedStd, MedStd, TotalStd
1.0.1
record
2024-10-21
R
R 4.4.0 released · 2024-04-24

Package metadata

First published: 2024-10-21
Total releases: 10 / 2 yrs
License: GPL (>= 3) OSI
Minimum R: ≥ 3.5.0
Download size: 137 KB

Cite

Cite this package

Run in R for the authors' preferred citation:

citation("cTMed")

The package provides a citation file that builds its entry when R runs it. Run citation() to see it.

The repository also keeps a CITATION.cff.

Cite the R Observatory

For a number measured here: a download total, a coverage figure, an archival date.

Format

APA

Balamuta, J. J. (2026). R Observatory: Metrics for cTMed version 1.0.10 [Data set]. HJJB, LLC. Data release v2026-10-24. https://doi.org/10.5281/zenodo.21843040

From data release v2026-10-24, which the citation names so these numbers can be found later. More on citing and the projects behind them.

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