R Observatory: Metrics for bubbleHeatmap version 0.1.1

Balamuta, James Joseph

doi:10.5281/zenodo.21843040

bubbleHeatmap

0.1.1

Produces 'bubbleHeatmap' Plots for Visualising Metabolomics Data

0packages depend

3Kdownloads / year

–test coverage

0/13checks pass

Overview

About

Maintained by Ruth BoxallFirst published 2023-02-172 releasesCRAN page ↗

Plotting package based on the grid system, combining elements of a bubble plot and heatmap to conveniently display two numerical variables, (represented by color and size) grouped by categorical variables on the x and y axes. This is a useful alternative to a forest plot when the data can be grouped in two dimensions, such as predictors x outcomes. It has particular advantages for visualising the metabolic measures produced by the 'Nightingale Health' metabolomics platform, and templates are included for automatically generating figures from these datasets.

Install

R (CRAN)Ubuntu (r2u)Fedora (COPR)openSUSE (OBS)

install.packages("bubbleHeatmap", repos = "https://cloud.r-project.org/")

Installs the current CRAN release. Prebuilt binaries on Windows and macOS.

Release

# enable cranapt (r2u) if it is not already set up, then install
grep -rqs r2u.stat.illinois.edu /etc/apt/sources.list /etc/apt/sources.list.d/ \
  || curl -fsSL https://raw.githubusercontent.com/eddelbuettel/r2u/master/inst/scripts/add_cranapt_noble.sh | sudo bash
sudo apt install -y r-cran-bubbleheatmap

Fast Ubuntu binaries via r2u (no compilation). The cranapt setup runs once and is skipped when it is already enabled.

bspm (used by r2u) also needs make: sudo apt install make

# enable the iucar/cran COPR if it is not already present, then install
ls /etc/yum.repos.d/*iucar*cran*.repo >/dev/null 2>&1 \
  || sudo dnf copr enable -y iucar/cran
sudo dnf install -y R-CRAN-bubbleHeatmap

RPMs from the iucar/cran COPR, rebuilt from CRAN.

For install.packages() integration in R, also: sudo dnf install R-CoprManager

# add the autoCRAN OBS repo (Tumbleweed) if it is missing, then install
zypper -q lr | grep -qi autoCRAN \
  || sudo zypper addrepo https://download.opensuse.org/repositories/devel:/languages:/R:/autoCRAN/openSUSE_Tumbleweed/devel:languages:R:autoCRAN.repo
sudo zypper install -y R-bubbleHeatmap

RPMs auto-built from CRAN on openSUSE OBS (Tumbleweed).

Health

CRAN checks

13NOTE

Failing flavors

NOTE r-devel-linux-x86_64-debian-clang
NOTE r-devel-linux-x86_64-debian-gcc
NOTE r-devel-linux-x86_64-fedora-clang
NOTE r-devel-linux-x86_64-fedora-gcc
NOTE r-devel-windows-x86_64
NOTE r-oldrel-macos-arm64
NOTE r-oldrel-macos-x86_64
NOTE r-oldrel-windows-x86_64
NOTE r-patched-linux-x86_64
NOTE r-release-linux-x86_64
NOTE r-release-macos-arm64
NOTE r-release-macos-x86_64
NOTE r-release-windows-x86_64

Slowest check: 1.2 min · r-oldrel-windows-x86_64

Code health

None

Tests · ratio 0.00

not tracked

Coverage

100%

Documentation · exports

3

Dependencies · direct

Check history

NOTE2026-03-10
0 OK · 14 NOTE · 0 WARNING · 0 ERROR · 0 FAILURE

Documentation

READMENoVignettesYes · dynamicpkgdown siteNoNEWSNoCode of conductNoContributing guideNo

Examples that run: 100%
Documented parameters: 80%
Return-value docs: 100%
References docs: 0%

Downloads

3K

CRAN downloads in the past year

Rank #15,529 · ~8/day · ~250/mo

Releases R versions

Daily download trend is not available in this view yet.

18130 days

69190 days

3K1 year

Compare downloads with other packages →

Also on123 r2u34 autocran

Dependencies

Declared dependencies

3 external dependencies (excludes base and recommended)

Depends (2)

R >= 3.5.0grid

Imports (2)

reshapemethods

LinkingTo (0)

none

Suggests (2)

rmarkdown knitr

Enhances (0)

none

Dependency license breakdown →

Reverse dependencies

0direct

0indirect

Nothing depends on this yet.

Code & Tests

Datasets

People & History

People (3)

Maintainer (1)

Ruth Boxall

Author, Maintainer

Authors (1)

Ruth Boxall

Author, Maintainer

Contributors (2)

Michael Holmes

Contributor

Robin Walters

Contributor

Package Timeline

2 releases. Pick two to compare their code metrics. R releases are shown for context.

R
R 4.6.0 released · 2026-04-24
R
R 4.5.0 released · 2025-04-11
R
R 4.4.0 released · 2024-04-24
0.1.1Latest
2023-05-15 · current release · diff ↗
R
R 4.3.0 released · 2023-04-21
0.1.0
2023-02-17
R
R 4.2.0 released · 2022-04-22

Package metadata

First published: 2023-02-17
Total releases: 2 / 3 yrs
License: GPL-3 OSI
Minimum R: ≥ 3.5.0
Bundled data: 15 KB / 3 files
Download size: 167 KB
Installed size: not tracked yet
With dependencies: not tracked yet

Cite

Cite this package

Run in R for the authors' preferred citation:

citation("bubbleHeatmap")

Format

Boxall, R., Holmes, M., & Walters, R. (2023). bubbleHeatmap: Produces 'bubbleHeatmap' Plots for Visualising Metabolomics Data (Version 0.1.1) [Computer software]. https://doi.org/10.32614/CRAN.package.bubbleHeatmap

This is what citation() produces when a package has no citation file of its own. If it prints something else, use that.

Cite the R Observatory

For a number measured here: a download total, a coverage figure, an archival date.

Format

APA

Balamuta, J. J. (2026). R Observatory: Metrics for bubbleHeatmap version 0.1.1 [Data set]. HJJB, LLC. Data release v2026-08-23. https://doi.org/10.5281/zenodo.21843040

From data release v2026-08-23, which the citation names so these numbers can be found later. More on citing and the projects behind them.

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