Skip to content

brainGraph

Graph Theory Analysis of Brain MRI Data

v3.1.1 · Oct 15, 2025 · GPL-3

Description

A set of tools for performing graph theory analysis of brain MRI data. It works with data from a Freesurfer analysis (cortical thickness, volumes, local gyrification index, surface area), diffusion tensor tractography data (e.g., from FSL) and resting-state fMRI data (e.g., from DPABI). It contains a graphical user interface for graph visualization and data exploration, along with several functions for generating useful figures.

Downloads

766

Last 30 days

4694th

1.9K

Last 90 days

9.5K

Last year

Trend: +26.2% (30d vs prior 30d)

CRAN Check Status

7 NOTE
7 OK
Show all 14 flavors
Flavor Status
r-devel-linux-x86_64-debian-clang NOTE
r-devel-linux-x86_64-debian-gcc NOTE
r-devel-linux-x86_64-fedora-clang NOTE
r-devel-linux-x86_64-fedora-gcc NOTE
r-devel-macos-arm64 NOTE
r-devel-windows-x86_64 NOTE
r-oldrel-macos-arm64 OK
r-oldrel-macos-x86_64 OK
r-oldrel-windows-x86_64 OK
r-patched-linux-x86_64 NOTE
r-release-linux-x86_64 OK
r-release-macos-arm64 OK
r-release-macos-x86_64 OK
r-release-windows-x86_64 OK
Check details (7 non-OK)
NOTE r-devel-linux-x86_64-debian-clang

Rd \usage sections

S3 methods shown with full name in Rd file 'glm_influence.Rd':
  ‘dffits.bg_GLM’

The \usage entries for S3 methods should use the \method markup and not
their full name.
See chapter ‘Writing R documentation files’ in the ‘Writing R
Extensions’ manual.
NOTE r-devel-linux-x86_64-debian-gcc

Rd \usage sections

S3 methods shown with full name in Rd file 'glm_influence.Rd':
  ‘dffits.bg_GLM’

The \usage entries for S3 methods should use the \method markup and not
their full name.
See chapter ‘Writing R documentation files’ in the ‘Writing R
Extensions’ manual.
NOTE r-devel-linux-x86_64-fedora-clang

Rd \usage sections

S3 methods shown with full name in Rd file 'glm_influence.Rd':
  ‘dffits.bg_GLM’

The \usage entries for S3 methods should use the \method markup and not
their full name.
See chapter ‘Writing R documentation files’ in the ‘Writing R
Extensions’ manual.
NOTE r-devel-linux-x86_64-fedora-gcc

Rd \usage sections

S3 methods shown with full name in Rd file 'glm_influence.Rd':
  ‘dffits.bg_GLM’

The \usage entries for S3 methods should use the \method markup and not
their full name.
See chapter ‘Writing R documentation files’ in the ‘Writing R
Extensions’ manual.
NOTE r-devel-macos-arm64

Rd \usage sections

S3 methods shown with full name in Rd file 'glm_influence.Rd':
  ‘dffits.bg_GLM’

The \usage entries for S3 methods should use the \method markup and not
their full name.
See chapter ‘Writing R documentation files’ in the ‘Writing R
Extensions’ manual.
NOTE r-devel-windows-x86_64

Rd \usage sections

S3 methods shown with full name in Rd file 'glm_influence.Rd':
  'dffits.bg_GLM'

The \usage entries for S3 methods should use the \method markup and not
their full name.
See chapter 'Writing R documentation files' in the 'Writing R
Extensions' manual.
NOTE r-patched-linux-x86_64

Rd \usage sections

S3 methods shown with full name in Rd file 'glm_influence.Rd':
  ‘dffits.bg_GLM’

The \usage entries for S3 methods should use the \method markup and not
their full name.
See chapter ‘Writing R documentation files’ in the ‘Writing R
Extensions’ manual.

Check History

NOTE 9 OK · 5 NOTE · 0 WARNING · 0 ERROR · 0 FAILURE Mar 10, 2026
NOTE r-devel-linux-x86_64-debian-clang

Rd \usage sections

S3 methods shown with full name in Rd file 'glm_influence.Rd':
  ‘dffits.bg_GLM’

The \usage entries for S3 methods should use the \method markup and not
their full name.
See chapter ‘Writing R documentation files’ in the ‘Writing R
Extensions’ manual.
NOTE r-devel-linux-x86_64-debian-gcc

Rd \usage sections

S3 methods shown with full name in Rd file 'glm_influence.Rd':
  ‘dffits.bg_GLM’

The \usage entries for S3 methods should use the \method markup and not
their full name.
See chapter ‘Writing R documentation files’ in the ‘Writing R
Extensions’ manual.
NOTE r-devel-linux-x86_64-fedora-clang

Rd \usage sections

S3 methods shown with full name in Rd file 'glm_influence.Rd':
  ‘dffits.bg_GLM’

The \usage entries for S3 methods should use the \method markup and not
their full name.
See chapter ‘Writing R documentation files’ in the ‘Writing R
Extensions’ manual.
NOTE r-devel-linux-x86_64-fedora-gcc

Rd \usage sections

S3 methods shown with full name in Rd file 'glm_influence.Rd':
  ‘dffits.bg_GLM’

The \usage entries for S3 methods should use the \method markup and not
their full name.
See chapter ‘Writing R documentation files’ in the ‘Writing R
Extensions’ manual.
NOTE r-devel-windows-x86_64

Rd \usage sections

S3 methods shown with full name in Rd file 'glm_influence.Rd':
  'dffits.bg_GLM'

The \usage entries for S3 methods should use the \method markup and not
their full name.
See chapter 'Writing R documentation files' in the 'Writing R
Extensions' manual.

Reverse Dependencies (4)

suggests

Dependency Network

Dependencies Reverse dependencies igraph abind data.table doParallel foreach lattice MASS Matrix permute PopulateR etree priorCON cograph brainGraph

Version History

new 3.1.1 Mar 10, 2026
updated 3.1.1 ← 3.1.0 diff Oct 15, 2025
updated 3.1.0 ← 3.0.0 diff Apr 3, 2024
updated 3.0.0 ← 2.7.3 diff Sep 28, 2020
updated 2.7.3 ← 2.7.2 diff Nov 6, 2019
updated 2.7.2 ← 2.2.0 diff Nov 5, 2019
updated 2.2.0 ← 2.0.2 diff May 28, 2018
updated 2.0.2 ← 2.0.0 diff Feb 22, 2018
updated 2.0.0 ← 1.0.0 diff Feb 5, 2018
updated 1.0.0 ← 0.72.0 diff Apr 9, 2017
updated 0.72.0 ← 0.62.0 diff Oct 9, 2016
updated 0.62.0 ← 0.55.0 diff Apr 22, 2016
updated 0.55.0 ← 0.48.0 diff Dec 23, 2015
new 0.48.0 Dec 8, 2015