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brainGraph

Graph Theory Analysis of Brain MRI Data

v3.1.2 · Apr 30, 2026 · GPL-3

Description

A set of tools for performing graph theory analysis of brain MRI data. It works with data from a Freesurfer analysis (cortical thickness, volumes, local gyrification index, surface area), diffusion tensor tractography data (e.g., from FSL) and resting-state fMRI data (e.g., from DPABI). It contains a graphical user interface for graph visualization and data exploration, along with several functions for generating useful figures.

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CRAN Check Status

13 OK
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r-devel-linux-x86_64-debian-clang OK
r-devel-linux-x86_64-debian-gcc OK
r-devel-linux-x86_64-fedora-clang OK
r-devel-linux-x86_64-fedora-gcc OK
r-devel-windows-x86_64 OK
r-oldrel-macos-arm64 OK
r-oldrel-macos-x86_64 OK
r-oldrel-windows-x86_64 OK
r-patched-linux-x86_64 OK
r-release-linux-x86_64 OK
r-release-macos-arm64 OK
r-release-macos-x86_64 OK
r-release-windows-x86_64 OK

Check History

OK 13 OK · 0 NOTE · 0 WARNING · 0 ERROR · 0 FAILURE May 7, 2026
NOTE 9 OK · 5 NOTE · 0 WARNING · 0 ERROR · 0 FAILURE Mar 10, 2026
NOTE r-devel-linux-x86_64-debian-clang

Rd \usage sections

S3 methods shown with full name in Rd file 'glm_influence.Rd':
  ‘dffits.bg_GLM’

The \usage entries for S3 methods should use the \method markup and not
their full name.
See chapter ‘Writing R documentation files’ in the ‘Writing R
Extensions’ manual.
NOTE r-devel-linux-x86_64-debian-gcc

Rd \usage sections

S3 methods shown with full name in Rd file 'glm_influence.Rd':
  ‘dffits.bg_GLM’

The \usage entries for S3 methods should use the \method markup and not
their full name.
See chapter ‘Writing R documentation files’ in the ‘Writing R
Extensions’ manual.
NOTE r-devel-linux-x86_64-fedora-clang

Rd \usage sections

S3 methods shown with full name in Rd file 'glm_influence.Rd':
  ‘dffits.bg_GLM’

The \usage entries for S3 methods should use the \method markup and not
their full name.
See chapter ‘Writing R documentation files’ in the ‘Writing R
Extensions’ manual.
NOTE r-devel-linux-x86_64-fedora-gcc

Rd \usage sections

S3 methods shown with full name in Rd file 'glm_influence.Rd':
  ‘dffits.bg_GLM’

The \usage entries for S3 methods should use the \method markup and not
their full name.
See chapter ‘Writing R documentation files’ in the ‘Writing R
Extensions’ manual.
NOTE r-devel-windows-x86_64

Rd \usage sections

S3 methods shown with full name in Rd file 'glm_influence.Rd':
  'dffits.bg_GLM'

The \usage entries for S3 methods should use the \method markup and not
their full name.
See chapter 'Writing R documentation files' in the 'Writing R
Extensions' manual.

Reverse Dependencies (4)

suggests

Dependency Network

Dependencies Reverse dependencies igraph abind data.table doParallel foreach lattice MASS Matrix permute PopulateR etree priorCON cograph brainGraph

Version History

15 tracked
updated 3.1.2 ← 3.1.1 diff Apr 30, 2026
new 3.1.1 Mar 10, 2026
updated 3.1.1 ← 3.1.0 diff Oct 15, 2025
updated 3.1.0 ← 3.0.0 diff Apr 3, 2024
updated 3.0.0 ← 2.7.3 diff Sep 28, 2020
updated 2.7.3 ← 2.7.2 diff Nov 6, 2019
updated 2.7.2 ← 2.2.0 diff Nov 5, 2019
updated 2.2.0 ← 2.0.2 diff May 28, 2018
updated 2.0.2 ← 2.0.0 diff Feb 22, 2018
updated 2.0.0 ← 1.0.0 diff Feb 5, 2018
updated 1.0.0 ← 0.72.0 diff Apr 9, 2017
updated 0.72.0 ← 0.62.0 diff Oct 9, 2016
updated 0.62.0 ← 0.55.0 diff Apr 22, 2016
updated 0.55.0 ← 0.48.0 diff Dec 23, 2015
new 0.48.0 Dec 8, 2015