R Observatory: Metrics for bmotif version 2.0.2

Balamuta, James Joseph

doi:10.5281/zenodo.21843040

This package was removed from CRAN on 2022-12-05. Its history is shown below.

Reason: issues were not corrected despite reminders

Details below reflect version 2.0.2, its last release before removal.

bmotif

2.0.2Package record

Motif Analyses of Bipartite Networks

0packages depend

–downloads / year

–test coverage

–flavors OK

Overview

About

Maintained by Benno SimmonsCRAN page ↗

Counts occurrences of motifs in bipartite networks, as well as the number of times each node or link appears in each unique position within motifs. Has support for both binary and weighted motifs: can calculate the mean weight of motifs and the standard deviation of their mean weights. Intended for use in ecology, but its methods are general and can be applied to any bipartite network. Full details are given in Simmons et al. (2019) doi:10.1111/2041-210X.13149.

Install

R (source archive)

url <- "https://cran.r-project.org/src/contrib/Archive/bmotif/bmotif_2.0.2.tar.gz"
pkgFile <- "bmotif_2.0.2.tar.gz"
download.file(url, pkgFile)
install.packages(pkgFile, type = "source", repos = NULL)

This package is no longer on CRAN, so install.packages() cannot fetch it by name. This downloads the last archived source (2.0.2) and builds it locally. Install its dependencies first, and note that building from source needs the usual compiler toolchain.

Health

CRAN checks

CRAN check results are not tracked yet.

Advisories

none known

How this is measured·How advisories are found

Documentation

In release 2.0.2

READMEYes · 1,065 wordsVignettesYes · 1 · dynamicNEWSYes · 100% structuredCitation fileYes · cites a publicationWebsitenot declared in DESCRIPTION

Help pages: 3
Examples that run: 100%3 run in a plain check
Exported functions with examples: 100%
Documented parameters: 100%
Return-value docs: 100%
Help pages citing references: 100%

How these are measured

Downloads

Releases R versions

Daily download trend is not available in this view yet.

Compare downloads with other packages →

Also on285 r2u30 autocran

How downloads are counted

Dependencies

Declared dependencies

8 external dependencies (excludes base and recommended)

Depends (1)

R >= 3.5.0

Imports (5)

tensor Rcpp reshape2 gtoolsstats

LinkingTo (1)

Rcpp

Suggests (3)

testthat knitr rmarkdown

Enhances (0)

none

Dependency license breakdown →

Reverse dependencies

0direct

–indirect (not tracked)

Nothing depends on this yet.

How these are counted

Code & Tests

People & History

People (4)

Benno Simmons

Author, Maintainer since 1.0.0 (2018)

Michelle Sweering

Author

Maybritt Schillinger

Author · added in 2.0.0

Riccardo Di Clemente

Author

Releases (4)

Pick two releases to compare their code metrics.

R
R 4.3.0 released · 2023-04-21
archivedRemoved from CRAN
2022-12-05
issues were not corrected despite reminders
R
R 4.2.0 released · 2022-04-22
R
R 4.1.0 released · 2021-05-18
unarchivedReturned to CRAN
2020-09-11
2.0.2
record
2020-09-11 · diff ↗
archivedRemoved from CRAN
2020-07-23
check problems were not corrected in time
2.0.1
record
2020-07-02 · diff ↗
R
R 4.0.0 released · 2020-04-24
2.0.0
record
2019-12-11 · diff ↗ ·
removed 1 export
positions

added 2 exports
link_positions, node_positions
R
R 3.6.0 released · 2019-04-26
R
R 3.5.0 released · 2018-04-23
1.0.0
record
2018-01-29
R
R 3.4.0 released · 2017-04-21

Package metadata

First published: 2018-01-29
Total releases: 4 / 8 yrs
License: MIT + file LICENSE OSI
Minimum R: ≥ 3.5.0

Cite

Cite this package

Run in R for the authors' entry:

citation("bmotif")

The package provides a citation file, so citation() returns the authors' own entry.

It points to 10.1111/2041-210x.13149.

Cite the R Observatory

For a number measured here: a download total, a coverage figure, an archival date.

Format

APA

Balamuta, J. J. (2026). R Observatory: Metrics for bmotif version 2.0.2 [Data set]. HJJB, LLC. Data release v2026-10-25. https://doi.org/10.5281/zenodo.21843040

From data release v2026-10-25, which the citation names so these numbers can be found later. More on citing and the projects behind them.

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