Description
The main purpose of this package is to propose a transparent methodological framework to compare bioregionalization methods based on hierarchical and non-hierarchical clustering algorithms (Kreft & Jetz (2010) <doi:10.1111/j.1365-2699.2010.02375.x>) and network algorithms (Lenormand et al. (2019) <doi:10.1002/ece3.4718> and Leroy et al. (2019) <doi:10.1111/jbi.13674>).
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Show all 14 flavors
| Flavor | Status |
|---|---|
| r-devel-linux-x86_64-debian-clang | OK |
| r-devel-linux-x86_64-debian-gcc | OK |
| r-devel-linux-x86_64-fedora-clang | OK |
| r-devel-linux-x86_64-fedora-gcc | OK |
| r-devel-macos-arm64 | OK |
| r-devel-windows-x86_64 | OK |
| r-oldrel-macos-arm64 | ERROR |
| r-oldrel-macos-x86_64 | NOTE |
| r-oldrel-windows-x86_64 | NOTE |
| r-patched-linux-x86_64 | OK |
| r-release-linux-x86_64 | OK |
| r-release-macos-arm64 | OK |
| r-release-macos-x86_64 | OK |
| r-release-windows-x86_64 | OK |
Check details (4 non-OK)
NOTE
r-oldrel-macos-arm64
installed package size
installed size is 8.5Mb
sub-directories of 1Mb or more:
data 1.6Mb
help 4.7Mb
ERROR
r-oldrel-macos-arm64
re-building of vignette outputs
Error(s) in re-building vignettes:
--- re-building ‘a5_2_summary_metrics.Rmd’ using rmarkdown
Quitting from a5_2_summary_metrics.Rmd:122-153 [unnamed-chunk-2]
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
<error/rlang_error>
Error in `install_binaries()`:
! object 'testlouvain' not found
---
Backtrace:
▆
1. └─bioregion::install_binaries(verbose = FALSE)
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
Error: processing vignette 'a5_2_summary_metrics.Rmd' failed with diagnostics:
object 'testlouvain' not found
--- failed re-building ‘a5_2_summary_metrics.Rmd’
--- re-building ‘a5_3_compare_bioregionalizations.Rmd’ using rmarkdown
--- finished re-building ‘a5_3_compare_bioregionalizations.Rmd’
--- re-building ‘bioregion.Rmd’ using rmarkdown
--- finished re-building ‘bioregion.Rmd’
--- re-building ‘citations.Rmd’ using rmarkdown
--- finished re-building ‘citations.Rmd’
SUMMARY: processing the following file failed:
‘a5_2_summary_metrics.Rmd’
Error: Vignette re-building failed.
Execution halted
NOTE
r-oldrel-macos-x86_64
installed package size
installed size is 8.3Mb
sub-directories of 1Mb or more:
data 1.6Mb
help 4.7Mb
NOTE
r-oldrel-windows-x86_64
installed package size
installed size is 8.4Mb
sub-directories of 1Mb or more:
data 1.6Mb
help 4.7Mb
Check History
Archived
Mar 24, 2026
ERROR 10 OK · 2 NOTE · 0 WARNING · 2 ERROR · 0 FAILURE Mar 10, 2026
ERROR
r-release-macos-arm64
re-building of vignette outputs
Error(s) in re-building vignettes: --- re-building ‘a5_2_summary_metrics.Rmd’ using rmarkdown Quitting from a5_2_summary_metrics.Rmd:122-153 [unnamed-chunk-2] ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ <error/rl ...[truncated]... d re-building ‘bioregion.Rmd’ --- re-building ‘citations.Rmd’ using rmarkdown --- finished re-building ‘citations.Rmd’ SUMMARY: processing the following file failed: ‘a5_2_summary_metrics.Rmd’ Error: Vignette re-building failed. Execution halted
ERROR
r-oldrel-macos-arm64
installed package size
installed size is 8.5Mb
sub-directories of 1Mb or more:
data 1.6Mb
help 4.7Mb
NOTE
r-oldrel-macos-x86_64
installed package size
installed size is 9.6Mb
sub-directories of 1Mb or more:
data 2.7Mb
help 4.7Mb
NOTE
r-oldrel-windows-x86_64
installed package size
installed size is 8.7Mb
sub-directories of 1Mb or more:
data 1.6Mb
help 4.7Mb