Skip to content

biomod2

Ensemble Platform for Species Distribution Modeling

v4.3-4-5 · Jan 30, 2026 · GPL-3

Description

Functions for species distribution modeling, calibration and evaluation, ensemble of models, ensemble forecasting and visualization. The package permits to run consistently up to 10 single models on a presence/absences (resp presences/pseudo-absences) dataset and to combine them in ensemble models and ensemble projections. Some bench of other evaluation and visualisation tools are also available within the package.

Downloads

6.1K

Last 30 days

1581st

19.9K

Last 90 days

74.9K

Last year

Trend: -9.2% (30d vs prior 30d)

CRAN Check Status

1 ERROR
13 OK
Show all 14 flavors
Flavor Status
r-devel-linux-x86_64-debian-clang OK
r-devel-linux-x86_64-debian-gcc OK
r-devel-linux-x86_64-fedora-clang OK
r-devel-linux-x86_64-fedora-gcc OK
r-devel-macos-arm64 ERROR
r-devel-windows-x86_64 OK
r-oldrel-macos-arm64 OK
r-oldrel-macos-x86_64 OK
r-oldrel-windows-x86_64 OK
r-patched-linux-x86_64 OK
r-release-linux-x86_64 OK
r-release-macos-arm64 OK
r-release-macos-x86_64 OK
r-release-windows-x86_64 OK
Check details (1 non-OK)
ERROR r-devel-macos-arm64

examples

Running examples in ‘biomod2-Ex.R’ failed
The error most likely occurred in:

> ### Name: bm_CrossValidation
> ### Title: Build cross-validation table
> ### Aliases: bm_CrossValidation bm_CrossValidation_user.defined
> ###   bm_CrossValidation_user.defined,BIOMOD.formated.data-method
> ###   bm_CrossValidation_user.defined,BIOMOD.formated.data.PA-method
> ###   bm_CrossValidation_random
> ###   bm_CrossValidation_random,BIOMOD.formated.data-method
> ###   bm_CrossValidation_random,BIOMOD.formated.data.PA-method
> ###   bm_CrossValidation_kfold
> ###   bm_CrossValidation_kfold,BIOMOD.formated.data-method
> ###   bm_CrossValidation_kfold,BIOMOD.formated.data.PA-method
> ###   bm_CrossValidation_block
> ###   bm_CrossValidation_block,BIOMOD.formated.data-method
> ###   bm_CrossValidation_block,BIOMOD.formated.data.PA-method
> ###   bm_CrossValidation_strat
> ###   bm_CrossValidation_strat,BIOMOD.formated.data-method
> ###   bm_CrossValidation_strat,BIOMOD.formated.data.PA-method
> ###   b
...[truncated]...
 #
> # Create the different validation datasets
> 
> # random selection
> cv.r <- bm_CrossValidation(bm.format = myBiomodData,
+                            strategy = "random",
+                            nb.rep = 3,
+                            k = 0.8)


Checking Cross-Validation arguments...

   > Random cross-validation selection
> 
> # k-fold selection
> cv.k <- bm_CrossValidation(bm.format = myBiomodData,
+                            strategy = "kfold",
+                            nb.rep = 2,
+                            k = 3)


Checking Cross-Validation arguments...

   > k-fold cross-validation selection
> 
> # block selection
> cv.b <- bm_CrossValidation(bm.format = myBiomodData,
+                            strategy = "block")


Checking Cross-Validation arguments...

   > Block cross-validation selectionError in .local(bm.format, ...) : Package 'ENMeval' not found
Calls: bm_CrossValidation ... bm_CrossValidation_block -> bm_CrossValidation_block -> .local
Execution halted

Check History

ERROR 13 OK · 0 NOTE · 0 WARNING · 1 ERROR · 0 FAILURE Mar 10, 2026
ERROR r-devel-macos-arm64

examples

Running examples in ‘biomod2-Ex.R’ failed
The error most likely occurred in:

> ### Name: bm_CrossValidation
> ### Title: Build cross-validation table
> ### Aliases: bm_CrossValidation bm_CrossValidation_user.defined
> ###   bm_CrossValidation_user.d
...[truncated]...


Checking Cross-Validation arguments...

   > Block cross-validation selectionError in .local(bm.format, ...) : Package 'ENMeval' not found
Calls: bm_CrossValidation ... bm_CrossValidation_block -> bm_CrossValidation_block -> .local
Execution halted

Reverse Dependencies (5)

imports

suggests

Dependency Network

Dependencies Reverse dependencies terra sp reshape reshape2 abind foreach ggplot2 gbm rpart MASS pROC PresenceAbsence dplyr rlang scales RRgeo ecospat gecko blockCV caretSDM biomod2

Version History

new 4.3-4-5 Mar 10, 2026
updated 4.3-4-5 ← 4.3-4-4 diff Jan 29, 2026
updated 4.3-4-4 ← 4.3-4-3 diff Jan 25, 2026
updated 4.3-4-3 ← 4.2-6-2 diff Dec 21, 2025
updated 4.2-6-2 ← 4.2-5-2 diff Jan 23, 2025
updated 4.2-5-2 ← 4.2-5 diff Jun 13, 2024
updated 4.2-5 ← 4.2-4 diff May 1, 2024
updated 4.2-4 ← 4.2-3 diff Jun 15, 2023
updated 4.2-3 ← 4.2-2 diff May 10, 2023
updated 4.2-2 ← 4.1-2 diff Jan 15, 2023
updated 4.1-2 ← 3.5.1 diff Oct 24, 2022
updated 3.5.1 ← 3.4.6 diff Jun 10, 2021
updated 3.4.6 ← 3.3-7.1 diff Feb 25, 2020
updated 3.3-7.1 ← 3.3-7 diff Mar 7, 2019
updated 3.3-7 ← 3.1-64 diff Feb 29, 2016
updated 3.1-64 ← 3.1-48 diff Dec 9, 2014
updated 3.1-48 ← 3.1-25 diff Jul 6, 2014
updated 3.1-25 ← 3.1-24 diff Dec 1, 2013
updated 3.1-24 ← 3.1-18 diff Nov 24, 2013
updated 3.1-18 ← 2.1.15 diff Oct 24, 2013