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biocompute

Create and Manipulate BioCompute Objects

v1.1.1 · May 3, 2022 · AGPL-3

Description

Tools to create, validate, and export BioCompute Objects described in King et al. (2019) <doi:10.17605/osf.io/h59uh>. Users can encode information in data frames, and compose BioCompute Objects from the domains defined by the standard. A checksum validator and a JSON schema validator are provided. This package also supports exporting BioCompute Objects as JSON, PDF, HTML, or 'Word' documents, and exporting to cloud-based platforms.

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CRAN Check Status

14 OK
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Flavor Status
r-devel-linux-x86_64-debian-clang OK
r-devel-linux-x86_64-debian-gcc OK
r-devel-linux-x86_64-fedora-clang OK
r-devel-linux-x86_64-fedora-gcc OK
r-devel-macos-arm64 OK
r-devel-windows-x86_64 OK
r-oldrel-macos-arm64 OK
r-oldrel-macos-x86_64 OK
r-oldrel-windows-x86_64 OK
r-patched-linux-x86_64 OK
r-release-linux-x86_64 OK
r-release-macos-arm64 OK
r-release-macos-x86_64 OK
r-release-windows-x86_64 OK

Check History

OK 14 OK · 0 NOTE · 0 WARNING · 0 ERROR · 0 FAILURE Mar 10, 2026

Dependency Network

Dependencies Reverse dependencies jsonlite yaml digest uuid jsonvalidate httr curl crayon cli stringr magrittr rmarkdown biocompute

Version History

new 1.1.1 Mar 10, 2026
updated 1.1.1 ← 1.1.0 diff May 2, 2022
updated 1.1.0 ← 1.0.6 diff Oct 20, 2021
updated 1.0.6 ← 1.0.4 diff Sep 28, 2021
updated 1.0.4 ← 1.0.3 diff Oct 15, 2020
new 1.0.3 Nov 27, 2019