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bayesPO

Bayesian Inference for Presence-Only Data

v0.5.0 · Feb 1, 2024 · GPL-3

Description

Presence-Only data is best modelled with a Point Process Model. The work of Moreira and Gamerman (2022) <doi:10.1214/21-AOAS1569> provides a way to use exact Bayesian inference to model this type of data, which is implemented in this package.

Downloads

CRAN

369

Last 30 days

11818th

794

Last 90 days

3K

Last year

Trend: +93.2% (30d vs prior 30d)

r2u CRAN

24

Last 30 days

116

Last 90 days

421

Last year

Trend: -41.5% (30d vs prior 30d)

autoCRAN

12

Last 7 days

54

Last 30 days

2

All-time

autoCRAN-only: this name is served only by autoCRAN, so the count is exact.

CRAN Check Status

13 OK
Show all 13 flavors
Flavor Status
r-devel-linux-x86_64-debian-clang OK
r-devel-linux-x86_64-debian-gcc OK
r-devel-linux-x86_64-fedora-clang OK
r-devel-linux-x86_64-fedora-gcc OK
r-devel-windows-x86_64 OK
r-oldrel-macos-arm64 OK
r-oldrel-macos-x86_64 OK
r-oldrel-windows-x86_64 OK
r-patched-linux-x86_64 OK
r-release-linux-x86_64 OK
r-release-macos-arm64 OK
r-release-macos-x86_64 OK
r-release-windows-x86_64 OK

Check History

OK 12 OK · 0 NOTE · 0 WARNING · 0 ERROR · 0 FAILURE Apr 25, 2026
NOTE 12 OK · 2 NOTE · 0 WARNING · 0 ERROR · 0 FAILURE Apr 22, 2026
NOTE r-oldrel-macos-arm64

installed package size

installed size is 12.2Mb
  sub-directories of 1Mb or more:
    libs  11.6Mb
NOTE r-oldrel-macos-x86_64

installed package size

installed size is 12.4Mb
  sub-directories of 1Mb or more:
    libs  11.8Mb
ERROR 11 OK · 2 NOTE · 0 WARNING · 1 ERROR · 0 FAILURE Apr 18, 2026
ERROR r-devel-windows-x86_64

whether package can be installed

Installation failed.
See 'd:/Rcompile/CRANpkg/local/4.6/bayesPO.Rcheck/00install.out' for details.
NOTE r-oldrel-macos-arm64

installed package size

installed size is 12.2Mb
  sub-directories of 1Mb or more:
    libs  11.6Mb
NOTE r-oldrel-macos-x86_64

installed package size

installed size is 12.4Mb
  sub-directories of 1Mb or more:
    libs  11.8Mb
NOTE 12 OK · 2 NOTE · 0 WARNING · 0 ERROR · 0 FAILURE Apr 10, 2026
NOTE r-oldrel-macos-arm64

installed package size

installed size is 12.2Mb
  sub-directories of 1Mb or more:
    libs  11.6Mb
NOTE r-oldrel-macos-x86_64

installed package size

installed size is 12.4Mb
  sub-directories of 1Mb or more:
    libs  11.8Mb
ERROR 11 OK · 2 NOTE · 0 WARNING · 1 ERROR · 0 FAILURE Apr 9, 2026
ERROR r-devel-linux-x86_64-debian-gcc

whether package can be installed

Installation failed.
See ‘/home/hornik/tmp/R.check/r-devel-gcc/Work/PKGS/bayesPO.Rcheck/00install.out’ for details.
NOTE r-oldrel-macos-arm64

installed package size

installed size is 12.2Mb
  sub-directories of 1Mb or more:
    libs  11.6Mb
NOTE r-oldrel-macos-x86_64

installed package size

installed size is 12.4Mb
  sub-directories of 1Mb or more:
    libs  11.8Mb
NOTE 12 OK · 2 NOTE · 0 WARNING · 0 ERROR · 0 FAILURE Mar 10, 2026
NOTE r-oldrel-macos-arm64

installed package size

installed size is 12.2Mb
  sub-directories of 1Mb or more:
    libs  11.6Mb
NOTE r-oldrel-macos-x86_64

installed package size

installed size is 12.4Mb
  sub-directories of 1Mb or more:
    libs  11.8Mb

Code

Structure

Lines of code

4,313

Files

46

Compiled share

29.8%

Has compiled src

Yes

Language breakdown

R 1,803 (41.8%)C/C++/src 1,285 (29.8%)Docs 1,026 (23.8%)Vignettes 199 (4.6%)

API

Exported functions

6

Internal functions

20

Recent export changes

v0.2.0+6 GammaPrior, NormalPrior, bayesPO_model +3 more

Testing & CI

Has tests

No

Test-to-code ratio

0.00

testthat edition

CI present

No

CI type

[]

PR gated

No

Docs

Return-value doc rate

100%

\dontrun example ratio

0%

Roxygen coverage

100%

Has pkgdown

No

NEWS present

No

Health & Security signals

Informational signals; not verdicts.

on.exit coverage

100%

Unsafe pattern score

0

Dep constraint coverage

0%

Secret pattern count

0

Bundled 3rd-party code

2 items

Portability & License

Min R version

3.5.0

System requirements

C++ standard

License

GPL-3

License flags

SPDX valid, OSI approved

History

Versions

4

First release

2021-10-18

Latest release

2024-02-01

Avg cadence

128 days

Cold removal rate

Dep drift

0

LOC over versions

v0.2.0: 3,951 LOCv0.3.1: 4,095 LOCv0.4.1: 4,144 LOCv0.5.0: 4,313 LOC

Per-file churn detail lives in the source pipeline: https://github.com/r-observatory/cran-code-metrics.

Dependency Network

Dependencies Reverse dependencies Rcpp coda RcppProgress bayesPO

Version History

5 tracked
new 0.5.0 Mar 10, 2026
updated 0.5.0 ← 0.4.1 diff Jan 31, 2024
updated 0.4.1 ← 0.3.1 diff Sep 25, 2023
updated 0.3.1 ← 0.2.0 diff Oct 25, 2021
new 0.2.0 Oct 17, 2021