basicMCMCplots

Trace Plots, Density Plots and Chain Comparisons for MCMC Samples

v0.2.7 · Nov 4, 2021 · GPL-3

Description

Provides methods for examining posterior MCMC samples from a single chain using trace plots and density plots, and from multiple chains by comparing posterior medians and credible intervals from each chain. These plotting functions have a variety of options, such as figure sizes, legends, parameters to plot, and saving plots to file. Functions interface with the NIMBLE software package, see de Valpine, Turek, Paciorek, Anderson-Bergman, Temple Lang and Bodik (2017) <doi:10.1080/10618600.2016.1172487>.

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CRAN Check Status

14 OK

Show all 14 flavors

Flavor	Status	Time
r-devel-linux-x86_64-debian-clang	OK	23.2s
r-devel-linux-x86_64-debian-gcc	OK	18.7s
r-devel-linux-x86_64-fedora-clang	OK	33.7s
r-devel-linux-x86_64-fedora-gcc	OK	32.5s
r-devel-macos-arm64	OK	9s
r-devel-windows-x86_64	OK	45s
r-oldrel-macos-arm64	OK
r-oldrel-macos-x86_64	OK	23s
r-oldrel-windows-x86_64	OK	44s
r-patched-linux-x86_64	OK	20.8s
r-release-linux-x86_64	OK	20.4s
r-release-macos-arm64	OK
r-release-macos-x86_64	OK	27s
r-release-windows-x86_64	OK	43s

Check History

OK 14 OK · 0 NOTE · 0 WARNING · 0 ERROR · 0 FAILURE Mar 10, 2026

Reverse Dependencies (1)

suggests

nimbleSCR

Dependency Network

Version History

new 0.2.7 Mar 10, 2026

updated 0.2.7 ← 0.2.6 diff Nov 3, 2021

updated 0.2.6 ← 0.2.5 diff Oct 31, 2020

updated 0.2.5 ← 0.2.4 diff Feb 1, 2020

updated 0.2.4 ← 0.2.3 diff Nov 18, 2019

updated 0.2.3 ← 0.2.2 diff Oct 26, 2019

updated 0.2.2 ← 0.2.1 diff Jul 17, 2019

updated 0.2.1 ← 0.2.0 diff Jul 6, 2019

updated 0.2.0 ← 0.1.2 diff May 22, 2019

updated 0.1.2 ← 0.1.1 diff Dec 11, 2018

updated 0.1.1 ← 0.1.0 diff Nov 28, 2018

new 0.1.0 Sep 2, 2018