R Observatory: Metrics for barry version 0.2.2

Balamuta, James Joseph

doi:10.5281/zenodo.21843040

barry

0.2.2

Your Go-to Motif Accountant

2packages depend

2.5Kdownloads / year

–test coverage

13/13checks pass

Overview

About

Maintained by George Vega YonFirst published 2025-12-012 releasesCRAN page ↗GitHub ↗

Provides the 'C++' header-only library 'barry' for use in R packages. 'barry' is a 'C++' template library for counting sufficient statistics on binary arrays and building discrete exponential-family models. It provides tools for sparse arrays, user-defined count statistics, support set constraints, power set generation, and includes modules for Discrete Exponential Family Models (DEFMs) and network statistics. By placing these headers in this package, we offer an efficient distribution system for CRAN as replication of this code in the sources of other packages is avoided. This package follows the same approach as the 'BH' package which provides 'Boost' headers for R packages.

Install

R (CRAN)pak (dev)Ubuntu (r2u)Fedora (COPR)openSUSE (OBS)

install.packages("barry", repos = "https://cloud.r-project.org/")

Installs the current CRAN release. Prebuilt binaries on Windows and macOS.

if (!requireNamespace("pak", quietly = TRUE))
  install.packages("pak", repos = "https://cloud.r-project.org/")
pak::pak("USCbiostats/barryr")

Development version from USCbiostats/barryr. Installs pak first if it is not already available.

Release

# enable cranapt (r2u) if it is not already set up, then install
grep -rqs r2u.stat.illinois.edu /etc/apt/sources.list /etc/apt/sources.list.d/ \
  || curl -fsSL https://raw.githubusercontent.com/eddelbuettel/r2u/master/inst/scripts/add_cranapt_noble.sh | sudo bash
sudo apt install -y r-cran-barry

Fast Ubuntu binaries via r2u (no compilation). The cranapt setup runs once and is skipped when it is already enabled.

bspm (used by r2u) also needs make: sudo apt install make

# enable the iucar/cran COPR if it is not already present, then install
ls /etc/yum.repos.d/*iucar*cran*.repo >/dev/null 2>&1 \
  || sudo dnf copr enable -y iucar/cran
sudo dnf install -y R-CRAN-barry

RPMs from the iucar/cran COPR, rebuilt from CRAN.

For install.packages() integration in R, also: sudo dnf install R-CoprManager

# add the autoCRAN OBS repo (Tumbleweed) if it is missing, then install
zypper -q lr | grep -qi autoCRAN \
  || sudo zypper addrepo https://download.opensuse.org/repositories/devel:/languages:/R:/autoCRAN/openSUSE_Tumbleweed/devel:languages:R:autoCRAN.repo
sudo zypper install -y R-barry

RPMs auto-built from CRAN on openSUSE OBS (Tumbleweed).

Health

CRAN checks

13OK

Slowest check: 44 s · r-oldrel-windows-x86_64

Code health

None

Tests · ratio 0.00

not tracked

Coverage

0

Dependencies · direct

Check history

OK2026-08-05
13 OK · 0 NOTE · 0 WARNING · 0 ERROR · 0 FAILURE
NOTE2026-08-01
12 OK · 1 NOTE · 0 WARNING · 0 ERROR · 0 FAILURE
OK2026-07-16
13 OK · 0 NOTE · 0 WARNING · 0 ERROR · 0 FAILURE
WARNING2026-07-15
12 OK · 0 NOTE · 1 WARNING · 0 ERROR · 0 FAILURE
OK2026-03-10
14 OK · 0 NOTE · 0 WARNING · 0 ERROR · 0 FAILURE

Documentation

READMEYes · 461 wordsVignettesNopkgdown siteNoNEWSYes · 100% structuredCode of conductNoContributing guideNo

Examples that run: not tracked
Documented parameters: not tracked
Return-value docs: not tracked
References docs: 0%

Downloads

2.5K

CRAN downloads in the past year

Rank #15,601 · ~7/day · ~211/mo

Releases R versions

Daily download trend is not available in this view yet.

26230 days

68090 days

2.5K1 year

Compare downloads with other packages →

Also on81 r2u21 autocran

Repository

GitHub ↗ uscbiostats/barryr

0Stars

0Forks

0Open issues

0Open PRs

2Releases

13Commits

2Contributors

motifsr-libraryr-packager-programmingrstatsstatistics

13 commits · Last activity 2026-08-06

Releases over time

2025-12-01 · 12026-07-23 · 2

Repository practices

Upstream repositoryBeta

4 development-tooling and community-health practices detected across 4 families in the upstream repository

Checks run against github.com/uscbiostats/barryr on 2026-08-09.

Continuous integration (1)

GitHub Actions

Reproducibility and dev environment (1)

Makefile

CRAN release process (1)

cran-comments.md

Docs source (1)

README.qmd

How this is detected·Detection ruleset v1 (2026-07-18)

Development tooling

AI-assisted toolingBeta

Uses AI-assisted development tooling (declared in repo)

Earliest detected marker: copilot on 2025-11-19

copilotclaude

Most recent: claude on 2026-07-15

Evidence

copilot: on 2025-11-19 · evidence A, D, PR · sole bot-author seen
claude: on 2026-07-15 · evidence B

How this is detected·Detection ruleset v2 (updated 2026-07-29)

Dependencies

Declared dependencies

0 external dependencies (excludes base and recommended)

Depends (1)

R >= 4.1.0

Imports (0)

none

LinkingTo (0)

none

Suggests (0)

none

Enhances (0)

none

Dependency license breakdown →

Reverse dependencies

2direct

0indirect

defm imaginarycss defm

Code & Tests

People & History

People (3)

Maintainer (1)

George Vega Yon

Author, Maintainer

Authors (1)

George Vega Yon

Author, Maintainer

Funders (2)

National Cancer Institute

Funder · added in 0.2.2

U.S. Army Medical Research Acquisition Activity

Funder · added in 0.2.2

Package Timeline

2 releases. Pick two to compare their code metrics. R releases are shown for context.

0.2.2Latest
2026-07-23 · current release · diff ↗
R
R 4.6.0 released · 2026-04-24
0.2.1
2026-03-10
R
R 4.5.0 released · 2025-04-11

Package metadata

First published: 2025-12-01
Total releases: 2 / 1 yrs
License: MIT + file LICENSE OSI
Minimum R: ≥ 4.1.0
Download size: 107 KB
Installed size: not tracked yet
With dependencies: not tracked yet

Cite

Cite this package

Run in R for the authors' preferred citation:

citation("barry")

Format

Vega Yon, G., National Cancer Institute, & U.S. Army Medical Research Acquisition Activity. (2026). barry: Your Go-to Motif Accountant (Version 0.2.2) [Computer software]. https://doi.org/10.32614/CRAN.package.barry

This is what citation() produces when a package has no citation file of its own. If it prints something else, use that.

Cite the R Observatory

For a number measured here: a download total, a coverage figure, an archival date.

Format

APA

Balamuta, J. J. (2026). R Observatory: Metrics for barry version 0.2.2 [Data set]. HJJB, LLC. Data release v2026-08-15. https://doi.org/10.5281/zenodo.21843040

From data release v2026-08-15, which the citation names so these numbers can be found later. More on citing and the projects behind them.

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