R Observatory: Metrics for bWGR version 2.2.18

Balamuta, James Joseph

doi:10.5281/zenodo.21843040

bWGR

2.2.18Package record

Bayesian Whole-Genome Regression

0packages dependsuggested by 1

6.5Kdownloads / year

–test coverage

13/13flavors OK

Overview

About

Maintained by Alencar XavierCRAN page ↗

Whole-genome regression methods on Bayesian framework fitted via EM or Gibbs sampling, single step (doi:10.1534/g3.119.400728), univariate and multivariate (doi:10.1186/s12711-022-00730-w, doi:10.1093/genetics/iyae179), with optional kernel term and sampling techniques (doi:10.1186/s12859-017-1582-3).

Install

R (CRAN)Ubuntu (r2u)Fedora (COPR)openSUSE (OBS)

install.packages("bWGR", repos = "https://cloud.r-project.org/")

Installs the current CRAN release. Prebuilt binaries on Windows and macOS.

Release

# enable cranapt (r2u) if it is not already set up, then install
grep -rqs r2u.stat.illinois.edu /etc/apt/sources.list /etc/apt/sources.list.d/ \
  || curl -fsSL https://raw.githubusercontent.com/eddelbuettel/r2u/master/inst/scripts/add_cranapt_noble.sh | sudo bash
sudo apt install -y r-cran-bwgr

Fast Ubuntu binaries via r2u (no compilation). The cranapt setup runs once and is skipped when it is already enabled. We list this channel from recorded r2u download activity rather than from a live index of the repository, so treat it as last known rather than guaranteed.

bspm (used by r2u) also needs make: sudo apt install make

# enable the iucar/cran COPR if it is not already present, then install
ls /etc/yum.repos.d/*iucar*cran*.repo >/dev/null 2>&1 \
  || sudo dnf copr enable -y iucar/cran
sudo dnf install -y R-CRAN-bWGR

RPMs from the iucar/cran COPR, rebuilt from CRAN.

For install.packages() integration in R, also: sudo dnf install R-CoprManager

# add the autoCRAN OBS repo (Tumbleweed) if it is missing, then install
zypper -q lr | grep -qi autoCRAN \
  || sudo zypper addrepo https://download.opensuse.org/repositories/devel:/languages:/R:/autoCRAN/openSUSE_Tumbleweed/devel:languages:R:autoCRAN.repo
sudo zypper install -y R-bWGR

RPMs auto-built from CRAN on openSUSE OBS (Tumbleweed). We list this channel from recorded autoCRAN download activity rather than from a live index of the repository, so treat it as last known rather than guaranteed.

Health

CRAN checks

13OK

CRAN check page ↗

Slowest check: 8.9 min · r-oldrel-macos-x86_64

Status changes

OK13 OK2026-09-08
ERROR12 OK, 1 ERROR2026-09-07
OK13 OK2026-08-05
NOTE12 OK, 1 NOTE2026-08-01
OK13 OK2026-05-02

Show 3 earlier changesHide 3 earlier changes

NOTE12 OK, 2 NOTE2026-04-22
ERROR11 OK, 2 NOTE, 1 ERROR2026-04-18
NOTE12 OK, 2 NOTE2026-03-10

Advisories

none known

How this is measured·How advisories are found

Documentation

In release 2.2.18

READMENoVignettesNoNEWSNoCitation fileYes · cites a publicationWebsitenot declared in DESCRIPTION

Help pages: 7includes a package overview page
Examples that run: 40%2 run in a plain check · 3 never run
Exported functions with examples: 67%
Documented parameters: not tracked
Return-value docs: not tracked
Help pages citing references: 43%

Also includes 2 demo scripts (run with demo())

How these are measured

Downloads

6.5K

CRAN downloads in the past year

Rank #4,548 · ~18/day · ~542/mo

Releases R versions

Daily download trend is not available in this view yet.

78930 days

1.9K90 days

6.5K1 year

Compare downloads with other packages →

Also on470 r2u13 autocran

How downloads are counted

Dependencies

Declared dependencies

3 external dependencies (excludes base and recommended)

Installing bWGR adds 2 packages (2 with compiled code, 3.5 MB of source tarballs). Heaviest: Rcpp 1.8 MB, RcppEigen 1.7 MB.

Depends (1)

R >= 4.0

Imports (2)

MatrixRcpp

LinkingTo (2)

Rcpp RcppEigen

Suggests (0)

none

Enhances (0)

none

Dependency license breakdown →

Reverse dependencies

0direct

0indirect

Suggested by 1

Suggests, most downloaded first

NAM

How these are counted

Code & Tests

Datasets

People & History

People (6)

Alencar Xavier

Author, Maintainer since 1.0 (2015)

David Habier

Author · added in 2.0

Kyle Kocak

Author · added in 1.6.4

William Muir

Author

Katy Rainey

Author · added in 2.2

Shizhong Xu

Author · added in 1.4

Listed in earlier versions (1)

Katy Rainey.

no longer listed · 1.0 to 2.1

Releases (40)

Pick two releases to compare their code metrics.

2.2.18Latest
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2026-07-25 · current release · diff ↗
R
R 4.6.0 released · 2026-04-24
2.2.17
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2025-12-11 · diff ↗
2.2.15
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2025-11-05 · diff ↗
2.2.14
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2025-10-29 · diff ↗
R
R 4.5.0 released · 2025-04-11
2.2.13
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2024-12-05 · diff ↗
2.2.12
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2024-11-18 · diff ↗
2.2.11
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2024-10-30 · diff ↗
2.2.10
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2024-09-17 · diff ↗
2.2.9
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2024-05-20 · diff ↗
2.2.8
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2024-04-28 · diff ↗
R
R 4.4.0 released · 2024-04-24
2.2.7
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2024-04-05 · diff ↗
2.2.6
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2024-03-03 · diff ↗
2.2.5
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2023-11-21 · diff ↗

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2.2.3
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2023-10-21 · diff ↗
2.2.2
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2023-09-03 · diff ↗
R
R 4.3.0 released · 2023-04-21
2.2
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2023-04-08 · diff ↗
2.1
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2022-07-16 · diff ↗
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R 4.2.0 released · 2022-04-22
2.0
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2022-02-14 · diff ↗
R
R 4.1.0 released · 2021-05-18
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R 4.0.0 released · 2020-04-24
1.6.6
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2020-01-08 · diff ↗
1.6.5
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2019-06-05 · diff ↗
1.6.4
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2019-05-20 · diff ↗
R
R 3.6.0 released · 2019-04-26
1.6.3
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2019-04-25 · diff ↗
1.6.2
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2019-04-10 · diff ↗
1.6.1
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2019-03-11 · diff ↗
1.6
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2019-02-13 · diff ↗
1.5.7
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2019-02-05 · diff ↗
1.5.6
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2018-10-05 · diff ↗
1.5.5
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2018-09-17 · diff ↗
1.5.4
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2018-08-08 · diff ↗
1.5.3
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2018-06-07 · diff ↗
R
R 3.5.0 released · 2018-04-23
1.5.2
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2018-03-20 · diff ↗
1.5.1
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2018-02-26 · diff ↗
1.5
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2017-10-16 · diff ↗
R
R 3.4.0 released · 2017-04-21
1.4
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2017-03-22 · diff ↗
1.3.2
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2016-09-21 · diff ↗
R
R 3.3.0 released · 2016-05-03
1.3.1
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2016-03-17 · diff ↗
1.3
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2015-11-19 · diff ↗
1.2
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2015-10-28 · diff ↗
1.1
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2015-10-21 · diff ↗
1.0
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2015-09-26
R
R 3.2.0 released · 2015-04-16

Package metadata

First published: 2015-09-26
Total releases: 40 / 11 yrs
License: GPL-3 OSI
Minimum R: ≥ 4.0
Bundled data: 11 KB / 1 file
Download size: 169 KB

Cite

Cite this package

Run in R for the authors' entry:

citation("bWGR")

The package provides a citation file, so citation() returns the authors' own entry.

It points to 10.1093/bioinformatics/btz794.

Cite the R Observatory

For a number measured here: a download total, a coverage figure, an archival date.

Format

APA

Balamuta, J. J. (2026). R Observatory: Metrics for bWGR version 2.2.18 [Data set]. HJJB, LLC. Data release v2026-10-25. https://doi.org/10.5281/zenodo.21843040

From data release v2026-10-25, which the citation names so these numbers can be found later. More on citing and the projects behind them.

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