Skip to content

autothresholdr

An R Port of the 'ImageJ' Plugin 'Auto Threshold'

v1.4.3 · Sep 26, 2025 · GPL-3

Description

Algorithms for automatically finding appropriate thresholds for numerical data, with special functions for thresholding images. Provides the 'ImageJ' 'Auto Threshold' plugin functionality to R users. See <https://imagej.net/plugins/auto-threshold> and Landini et al. (2017) <DOI:10.1111/jmi.12474>.

Downloads

CRAN

1.2K

Last 30 days

3340th

3.5K

Last 90 days

15.9K

Last year

Trend: -1.1% (30d vs prior 30d)

r2u CRAN

46

Last 30 days

133

Last 90 days

492

Last year

Trend: -8% (30d vs prior 30d)

CRAN Check Status

13 OK
Show all 13 flavors
Flavor Status
r-devel-linux-x86_64-debian-clang OK
r-devel-linux-x86_64-debian-gcc OK
r-devel-linux-x86_64-fedora-clang OK
r-devel-linux-x86_64-fedora-gcc OK
r-devel-windows-x86_64 OK
r-oldrel-macos-arm64 OK
r-oldrel-macos-x86_64 OK
r-oldrel-windows-x86_64 OK
r-patched-linux-x86_64 OK
r-release-linux-x86_64 OK
r-release-macos-arm64 OK
r-release-macos-x86_64 OK
r-release-windows-x86_64 OK

Check History

OK 13 OK · 0 NOTE · 0 WARNING · 0 ERROR · 0 FAILURE Jun 9, 2026
ERROR 12 OK · 0 NOTE · 0 WARNING · 1 ERROR · 0 FAILURE Jun 8, 2026
ERROR r-devel-linux-x86_64-debian-gcc

whether package can be installed

install log ‘’ does not exist
OK 14 OK · 0 NOTE · 0 WARNING · 0 ERROR · 0 FAILURE Apr 22, 2026
ERROR 13 OK · 0 NOTE · 0 WARNING · 1 ERROR · 0 FAILURE Apr 18, 2026
ERROR r-devel-windows-x86_64

whether package can be installed

Installation failed.
See 'd:/Rcompile/CRANpkg/local/4.6/autothresholdr.Rcheck/00install.out' for details.
OK 14 OK · 0 NOTE · 0 WARNING · 0 ERROR · 0 FAILURE Mar 10, 2026

Reverse Dependencies (4)

Dependency Network

Dependencies Reverse dependencies checkmate ijtiff magrittr purrr Rcpp rlang strex (>= 1.4.1) stringr coveR2 detrendr hemispheR nandb autothresholdr

Version History

26 tracked
new 1.4.3 Mar 10, 2026
updated 1.4.3 ← 1.4.2 diff Sep 26, 2025
updated 1.4.2 ← 1.4.1 diff Dec 12, 2023
updated 1.4.1 ← 1.4.0 diff Jan 27, 2023
updated 1.4.0 ← 1.3.12 diff Jan 3, 2022
updated 1.3.12 ← 1.3.11 diff Nov 17, 2021
updated 1.3.11 ← 1.3.10 diff May 11, 2021
updated 1.3.10 ← 1.3.9 diff Apr 18, 2021
updated 1.3.9 ← 1.3.7 diff Oct 17, 2020
updated 1.3.7 ← 1.3.6 diff Oct 9, 2020
updated 1.3.6 ← 1.3.5 diff May 7, 2020
updated 1.3.5 ← 1.3.4 diff Jul 7, 2019
updated 1.3.4 ← 1.3.3 diff Jun 27, 2019
updated 1.3.3 ← 1.3.2 diff Jun 11, 2019
updated 1.3.2 ← 1.3.1 diff May 29, 2019