R Observatory: Metrics for armada version 0.1.0

Balamuta, James Joseph

doi:10.5281/zenodo.21843040

This package was removed from CRAN on 2024-05-14. Its history is shown below.

Reason: requires archived package 'anapuce'

Details below reflect version 0.1.0, its last release before removal.

armada

0.1.0

A Statistical Methodology to Select Covariates in High-Dimensional Data under Dependence

0packages depend

–downloads / year

–test coverage

–checks pass

Overview

About

Maintained by Aurelie Gueudin1 releasesCRAN page ↗

Two steps variable selection procedure in a context of high-dimensional dependent data but few observations. First step is dedicated to eliminate dependence between variables (clustering of variables, followed by factor analysis inside each cluster). Second step is a variable selection using by aggregation of adapted methods. Bastien B., Chakir H., Gegout-Petit A., Muller-Gueudin A., Shi Y. A statistical methodology to select covariates in high-dimensional data under dependence. Application to the classification of genetic profiles associated with outcome of a non-small-cell lung cancer treatment. 2018. https://hal.archives-ouvertes.fr/hal-01939694.

Install

R (source archive)Ubuntu (r2u)

url <- "https://cran.r-project.org/src/contrib/Archive/armada/armada_0.1.0.tar.gz"
pkgFile <- "armada_0.1.0.tar.gz"
download.file(url, pkgFile)
install.packages(pkgFile, type = "source", repos = NULL)

This package is no longer on CRAN, so install.packages() cannot fetch it by name. This downloads the last archived source (0.1.0) and builds it locally. Install its dependencies first, and note that building from source needs the usual compiler toolchain.

Release

# enable cranapt (r2u) if it is not already set up, then install
grep -rqs r2u.stat.illinois.edu /etc/apt/sources.list /etc/apt/sources.list.d/ \
  || curl -fsSL https://raw.githubusercontent.com/eddelbuettel/r2u/master/inst/scripts/add_cranapt_noble.sh | sudo bash
sudo apt install -y r-cran-armada

Fast Ubuntu binaries via r2u (no compilation). The cranapt setup runs once and is skipped when it is already enabled.

bspm (used by r2u) also needs make: sudo apt install make

Health

CRAN checks

CRAN check results are not tracked yet.

Code health

None

Tests · ratio 0.00

not tracked

Coverage

100%

Documentation · exports

14

Dependencies · direct

Documentation

READMENoVignettesNopkgdown siteNoNEWSNoCode of conductNoContributing guideNo

Examples that run: 100%
Documented parameters: 97%
Return-value docs: 100%
References docs: 0%

Downloads

armada Releases R versions

Daily download trend is not available in this view yet.

Compare downloads with other packages →

Also on94 r2u

Dependencies

Declared dependencies

11 external dependencies (excludes base and recommended)

Depends (0)

none

Imports (14)

statsmvtnorm ClustOfVar FAMTgraphicsVSURF glmnet anapuce qvalueparalleldoParallel impute ComplexHeatmap circlize

LinkingTo (0)

none

Suggests (0)

none

Enhances (0)

none

Dependency license breakdown →

Reverse dependencies

0direct

–indirect (not tracked)

Nothing depends on this yet.

Code & Tests

People & History

People (2)

Maintainer (1)

Aurelie Gueudin

Author, Maintainer

Authors (2)

Aurelie Gueudin

Author, Maintainer

Anne Gegout-Petit

Author

Package Timeline

1 release. R releases are shown for context.

R
R 4.5.0 released · 2025-04-11
archivedRemoved from CRAN
2024-05-14
requires archived package 'anapuce'
R
R 4.4.0 released · 2024-04-24
R
R 4.3.0 released · 2023-04-21
R
R 4.2.0 released · 2022-04-22
R
R 4.1.0 released · 2021-05-18
R
R 4.0.0 released · 2020-04-24
R
R 3.6.0 released · 2019-04-26
0.1.0
2019-04-04
R
R 3.5.0 released · 2018-04-23

Package metadata

Total releases: 1
License: GPL-3 OSI
Bundled data: 47 KB / 3 files
Download size: not tracked yet
Installed size: not tracked yet
With dependencies: not tracked yet

Cite

Cite this package

Run in R for the authors' preferred citation:

citation("armada")

Format

Gueudin, A., & Gegout-Petit, A. (n.d.). armada: A Statistical Methodology to Select Covariates in High-Dimensional Data under Dependence (Version 0.1.0) [Computer software]. Retrieved August 13, 2026, from https://CRAN.R-project.org/package=armada

This is what citation() produces when a package has no citation file of its own. If it prints something else, use that.

Cite the R Observatory

For a number measured here: a download total, a coverage figure, an archival date.

Format

APA

Balamuta, J. J. (2026). R Observatory: Metrics for armada version 0.1.0 [Data set]. HJJB, LLC. Data release v2026-08-13. https://doi.org/10.5281/zenodo.21843040

From data release v2026-08-13, which the citation names so these numbers can be found later. More on citing and the projects behind them.

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