R Observatory: Metrics for afthd version 1.1.0

Balamuta, James Joseph

doi:10.5281/zenodo.21843040

afthd

1.1.0Package record

Accelerated Failure Time for High Dimensional Data with MCMC

1packages depend

4Kdownloads / year

–test coverage

13/13flavors OK

Overview

About

Maintained by Atanu BhattacharjeeCRAN page ↗

Functions for Posterior estimates of Accelerated Failure Time(AFT) model with MCMC and Maximum likelihood estimates of AFT model without MCMC for univariate and multivariate analysis in high dimensional gene expression data are available in this 'afthd' package. AFT model with Bayesian framework for multivariate in high dimensional data has been proposed by Prabhash et al.(2016) doi:10.21307/stattrans-2016-046.

Install

R (CRAN)Ubuntu (r2u)Fedora (COPR)openSUSE (OBS)

install.packages("afthd", repos = "https://cloud.r-project.org/")

Installs the current CRAN release. Prebuilt binaries on Windows and macOS.

Release

# enable cranapt (r2u) if it is not already set up, then install
grep -rqs r2u.stat.illinois.edu /etc/apt/sources.list /etc/apt/sources.list.d/ \
  || curl -fsSL https://raw.githubusercontent.com/eddelbuettel/r2u/master/inst/scripts/add_cranapt_noble.sh | sudo bash
sudo apt install -y r-cran-afthd

Fast Ubuntu binaries via r2u (no compilation). The cranapt setup runs once and is skipped when it is already enabled. We list this channel from recorded r2u download activity rather than from a live index of the repository, so treat it as last known rather than guaranteed.

bspm (used by r2u) also needs make: sudo apt install make

# enable the iucar/cran COPR if it is not already present, then install
ls /etc/yum.repos.d/*iucar*cran*.repo >/dev/null 2>&1 \
  || sudo dnf copr enable -y iucar/cran
sudo dnf install -y R-CRAN-afthd

RPMs from the iucar/cran COPR, rebuilt from CRAN.

For install.packages() integration in R, also: sudo dnf install R-CoprManager

# add the autoCRAN OBS repo (Tumbleweed) if it is missing, then install
zypper -q lr | grep -qi autoCRAN \
  || sudo zypper addrepo https://download.opensuse.org/repositories/devel:/languages:/R:/autoCRAN/openSUSE_Tumbleweed/devel:languages:R:autoCRAN.repo
sudo zypper install -y R-afthd

RPMs auto-built from CRAN on openSUSE OBS (Tumbleweed). We list this channel from recorded autoCRAN download activity rather than from a live index of the repository, so treat it as last known rather than guaranteed.

Health

CRAN checks

13OK

CRAN check page ↗

Slowest check: 3.9 min · r-oldrel-windows-x86_64

Status changes

OK13 OK2026-09-08
ERROR12 OK, 1 ERROR2026-09-07
OK13 OK2026-08-05
NOTE12 OK, 1 NOTE2026-08-01
OK13 OK2026-06-09

Show 2 earlier changesHide 2 earlier changes

ERROR12 OK, 1 ERROR2026-06-08
OK14 OK2026-03-10

Advisories

none known

How this is measured·How advisories are found

Documentation

In release 1.1.0

READMENoVignettesNoNEWSNoCitation fileNoWebsitenot declared in DESCRIPTION

Help pages: 15
Examples that run: 100%15 run in a plain check
Exported functions with examples: 100%
Documented parameters: 100%
Return-value docs: 100%
Help pages citing references: 80%

How these are measured

Downloads

4K

CRAN downloads in the past year

Rank #9,482 · ~11/day · ~337/mo

Releases R versions

Daily download trend is not available in this view yet.

37030 days

1K90 days

4K1 year

Compare downloads with other packages →

Also on91 r2u30 autocran

How downloads are counted

Dependencies

Declared dependencies

4 external dependencies (excludes base and recommended)

Installing afthd adds 49 packages (29 with compiled code, 33 MB of source tarballs). Heaviest: stringi 11 MB, glmnet 2.7 MB, Rcpp 1.8 MB.

Depends (1)

R >= 3.5.0

Imports (5)

glmnet photobiology R2jags rstpm2survival

LinkingTo (0)

none

Suggests (0)

none

Enhances (0)

none

Dependency license breakdown →

Reverse dependencies

1direct

0indirect

Imports 1

Depends, Imports or LinkingTo, most downloaded first

S3VS

How these are counted

Code & Tests

Datasets

People & History

People (3)

Atanu Bhattacharjee

Author, Maintainer since 0.1.0 (2021), Contributor

Pragya Kumari

Author, Contributor

Gajendra Kumar Vishwakarma

Author, Contributor

Releases (2)

Pick two releases to compare their code metrics.

R
R 4.6.0 released · 2026-04-24
R
R 4.5.0 released · 2025-04-11
R
R 4.4.0 released · 2024-04-24
R
R 4.3.0 released · 2023-04-21
R
R 4.2.0 released · 2022-04-22
1.1.0Latest
record
2021-10-01 · current release · diff ↗
0.1.0
record
2021-05-31
R
R 4.1.0 released · 2021-05-18

Package metadata

First published: 2021-05-31
Total releases: 2 / 5 yrs
License: GPL-3 OSI
Minimum R: ≥ 3.5.0
Bundled data: 324 KB / 1 file
Download size: 341 KB

Cite

Cite this package

Run in R for the authors' preferred citation:

citation("afthd")

Format

Bhattacharjee, A., Kumari, P., & Vishwakarma, G. K. (2021). afthd: Accelerated Failure Time for High Dimensional Data with MCMC (Version 1.1.0) [Computer software]. https://doi.org/10.32614/CRAN.package.afthd

This package has no citation file, so citation() returns this entry built from DESCRIPTION.

Cite the R Observatory

For a number measured here: a download total, a coverage figure, an archival date.

Format

APA

Balamuta, J. J. (2026). R Observatory: Metrics for afthd version 1.1.0 [Data set]. HJJB, LLC. Data release v2026-10-18. https://doi.org/10.5281/zenodo.21843040

From data release v2026-10-18, which the citation names so these numbers can be found later. More on citing and the projects behind them.

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