R Observatory: Metrics for adestr version 1.0.0

Balamuta, James Joseph

doi:10.5281/zenodo.21843040

adestr

1.0.0

Estimation in Optimal Adaptive Two-Stage Designs

0packages depend

3.1Kdownloads / year

90.0%test coverage

0/13checks pass

Overview

About

Maintained by Jan MeisFirst published 2023-09-272 releasesCRAN page ↗

Methods to evaluate the performance characteristics of various point and interval estimators for optimal adaptive two-stage designs as described in Meis et al. (2024) doi:10.1002/sim.10020. Specifically, this package is written to work with trial designs created by the 'adoptr' package (Kunzmann et al. (2021) doi:10.18637/jss.v098.i09; Pilz et al. (2021) doi:10.1002/sim.8953)). Apart from the a priori evaluation of performance characteristics, this package also allows for the evaluation of the implemented estimators on real datasets, and it implements methods to calculate p-values.

Latest changes · 1.0.0

Install

R (CRAN)Ubuntu (r2u)Fedora (COPR)openSUSE (OBS)

install.packages("adestr", repos = "https://cloud.r-project.org/")

Installs the current CRAN release. Prebuilt binaries on Windows and macOS.

Release

# enable cranapt (r2u) if it is not already set up, then install
grep -rqs r2u.stat.illinois.edu /etc/apt/sources.list /etc/apt/sources.list.d/ \
  || curl -fsSL https://raw.githubusercontent.com/eddelbuettel/r2u/master/inst/scripts/add_cranapt_noble.sh | sudo bash
sudo apt install -y r-cran-adestr

Fast Ubuntu binaries via r2u (no compilation). The cranapt setup runs once and is skipped when it is already enabled.

bspm (used by r2u) also needs make: sudo apt install make

# enable the iucar/cran COPR if it is not already present, then install
ls /etc/yum.repos.d/*iucar*cran*.repo >/dev/null 2>&1 \
  || sudo dnf copr enable -y iucar/cran
sudo dnf install -y R-CRAN-adestr

RPMs from the iucar/cran COPR, rebuilt from CRAN.

For install.packages() integration in R, also: sudo dnf install R-CoprManager

# add the autoCRAN OBS repo (Tumbleweed) if it is missing, then install
zypper -q lr | grep -qi autoCRAN \
  || sudo zypper addrepo https://download.opensuse.org/repositories/devel:/languages:/R:/autoCRAN/openSUSE_Tumbleweed/devel:languages:R:autoCRAN.repo
sudo zypper install -y R-adestr

RPMs auto-built from CRAN on openSUSE OBS (Tumbleweed).

Health

CRAN checks

13NOTE

Failing flavors

NOTE r-devel-linux-x86_64-debian-clang
NOTE r-devel-linux-x86_64-debian-gcc
NOTE r-devel-linux-x86_64-fedora-clang
NOTE r-devel-linux-x86_64-fedora-gcc
NOTE r-devel-windows-x86_64
NOTE r-oldrel-macos-arm64
NOTE r-oldrel-macos-x86_64
NOTE r-oldrel-windows-x86_64
NOTE r-patched-linux-x86_64
NOTE r-release-linux-x86_64
NOTE r-release-macos-arm64
NOTE r-release-macos-x86_64
NOTE r-release-windows-x86_64

Slowest check: 8.2 min · r-devel-windows-x86_64

Code health

Yes

Tests · ratio 0.33

90.0%

Coverage · measured lines

100%

Documentation · exports

13

Dependencies · direct

Check history

NOTE2026-06-09
0 OK · 13 NOTE · 0 WARNING · 0 ERROR · 0 FAILURE
ERROR2026-06-08
0 OK · 12 NOTE · 0 WARNING · 1 ERROR · 0 FAILURE
NOTE2026-03-10
3 OK · 11 NOTE · 0 WARNING · 0 ERROR · 0 FAILURE

Documentation

READMEYes · 238 wordsVignettesYes · dynamicpkgdown siteNoNEWSYes · 100% structuredCode of conductNoContributing guideNo

Examples that run: 100%
Documented parameters: 98%
Return-value docs: 100%
References docs: 16%

Downloads

3.1K

CRAN downloads in the past year

Rank #12,259 · ~8/day · ~257/mo

Releases R versions

Daily download trend is not available in this view yet.

22330 days

81190 days

3.1K1 year

Compare downloads with other packages →

Also on422 r2u23 autocran

Repository

GitHub ↗ jan-imbi/adestr

0Stars

1Forks

0Open issues

0Open PRs

0Releases

63Commits

1Contributors

pointestimationconfidenceintervalsadaptivedesignsoptimalparameter

License GPL-2.0 · 63 commits · Last activity 2024-07-12

Forks over time

2026-01-04 · 12026-07-07 · 1

Repository practices

Upstream repositoryBeta

4 development-tooling and community-health practices detected across 4 families in the upstream repository

Checks run against github.com/jan-imbi/adestr on 2026-08-16.

Continuous integration (1)

GitHub Actions

Docs source (1)

README.Rmd

Lint, format, editor (1)

RStudio project

Coverage (1)

Codecov

How this is detected·Detection ruleset v1 (2026-07-18)

Dependencies

Declared dependencies

15 external dependencies (excludes base and recommended)

Depends (2)

R >= 4.0.0adoptr

Imports (12)

methodsstatsgrDevicescubature ggplot2 ggpubr scales latex2exp forcats future.apply progressr Rdpack

LinkingTo (0)

none

Suggests (5)

covr knitr rmarkdown testthat microbenchmark

Enhances (0)

none

Dependency license breakdown →

Reverse dependencies

0direct

0indirect

Nothing depends on this yet.

Code & Tests

People & History

People (2)

Maintainer (1)

Jan Meis

Author, Maintainer

Authors (1)

Jan Meis

Author, Maintainer

Copyright holders (1)

Martin Maechler

Copyright holder

Package Timeline

2 releases. Pick two to compare their code metrics. R releases are shown for context.

R
R 4.6.0 released · 2026-04-24
R
R 4.5.0 released · 2025-04-11
1.0.0Latest
2024-07-12 · current release · diff ↗
R
R 4.4.0 released · 2024-04-24
0.5.0
2023-09-27
R
R 4.3.0 released · 2023-04-21

Package metadata

First published: 2023-09-27
Total releases: 2 / 3 yrs
License: GPL (>= 2) OSI
Minimum R: ≥ 4.0.0
Download size: 232 KB
Installed size: not tracked yet
With dependencies: not tracked yet

Appears in task views

Clinical Trial Design, Monitoring, Analysis and Reporting

Cite

Cite this package

Run in R for the authors' preferred citation:

citation("adestr")

Format

Meis, J., & Maechler, M. (2024). adestr: Estimation in Optimal Adaptive Two-Stage Designs (Version 1.0.0) [Computer software]. https://doi.org/10.32614/CRAN.package.adestr

This is what citation() produces when a package has no citation file of its own. If it prints something else, use that.

Cite the R Observatory

For a number measured here: a download total, a coverage figure, an archival date.

Format

APA

Balamuta, J. J. (2026). R Observatory: Metrics for adestr version 1.0.0 [Data set]. HJJB, LLC. Data release v2026-08-18. https://doi.org/10.5281/zenodo.21843040

From data release v2026-08-18, which the citation names so these numbers can be found later. More on citing and the projects behind them.

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