R Observatory: Metrics for adaptsmoFMRI version 1.2

Balamuta, James Joseph

doi:10.5281/zenodo.21843040

adaptsmoFMRI

1.2Package record

Adaptive Smoothing of FMRI Data

0packages depend

3.3Kdownloads / year

–test coverage

13/13flavors OK

Overview

About

Maintained by Maximilian HughesCRAN page ↗

Adaptive smoothing functions for estimating the blood oxygenation level dependent (BOLD) effect by using functional Magnetic Resonance Imaging (fMRI) data, based on adaptive Gauss Markov random fields, for real as well as simulated data. The implemented models make use of efficient Markov Chain Monte Carlo methods. Implemented methods are based on the research developed by A. Brezger, L. Fahrmeir, A. Hennerfeind (2007) https://www.jstor.org/stable/4626770.

Install

R (CRAN)Ubuntu (r2u)Fedora (COPR)openSUSE (OBS)

install.packages("adaptsmoFMRI", repos = "https://cloud.r-project.org/")

Installs the current CRAN release. Prebuilt binaries on Windows and macOS.

Release

# enable cranapt (r2u) if it is not already set up, then install
grep -rqs r2u.stat.illinois.edu /etc/apt/sources.list /etc/apt/sources.list.d/ \
  || curl -fsSL https://raw.githubusercontent.com/eddelbuettel/r2u/master/inst/scripts/add_cranapt_noble.sh | sudo bash
sudo apt install -y r-cran-adaptsmofmri

Fast Ubuntu binaries via r2u (no compilation). The cranapt setup runs once and is skipped when it is already enabled. We list this channel from recorded r2u download activity rather than from a live index of the repository, so treat it as last known rather than guaranteed.

bspm (used by r2u) also needs make: sudo apt install make

# enable the iucar/cran COPR if it is not already present, then install
ls /etc/yum.repos.d/*iucar*cran*.repo >/dev/null 2>&1 \
  || sudo dnf copr enable -y iucar/cran
sudo dnf install -y R-CRAN-adaptsmoFMRI

RPMs from the iucar/cran COPR, rebuilt from CRAN.

For install.packages() integration in R, also: sudo dnf install R-CoprManager

# add the autoCRAN OBS repo (Tumbleweed) if it is missing, then install
zypper -q lr | grep -qi autoCRAN \
  || sudo zypper addrepo https://download.opensuse.org/repositories/devel:/languages:/R:/autoCRAN/openSUSE_Tumbleweed/devel:languages:R:autoCRAN.repo
sudo zypper install -y R-adaptsmoFMRI

RPMs auto-built from CRAN on openSUSE OBS (Tumbleweed). We list this channel from recorded autoCRAN download activity rather than from a live index of the repository, so treat it as last known rather than guaranteed.

Health

CRAN checks

13OK

CRAN check page ↗

Slowest check: 2.2 min · r-oldrel-windows-x86_64

Status changes

OK13 OK2026-08-05
NOTE12 OK, 1 NOTE2026-08-01
OK13 OK2026-06-09
ERROR12 OK, 1 ERROR2026-06-08
OK14 OK2026-03-10

Advisories

none known

How this is measured·How advisories are found

Documentation

In release 1.2

READMENoVignettesNoNEWSNoCitation fileNoWebsitenot declared in DESCRIPTION

Help pages: 11includes a package overview page
Examples that run: 50%3 run in a plain check · 3 hold no code
Exported functions with examples: 75%
Documented parameters: not tracked
Return-value docs: not tracked
Help pages citing references: 9%

How these are measured

Downloads

3.3K

CRAN downloads in the past year

Rank #9,259 · ~9/day · ~272/mo

Releases R versions

Daily download trend is not available in this view yet.

33030 days

1.1K90 days

3.3K1 year

Compare downloads with other packages →

Also on97 r2u30 autocran190 c2d4u

How downloads are counted

Dependencies

Declared dependencies

5 external dependencies (excludes base and recommended)

Installing adaptsmoFMRI adds 22 packages (16 with compiled code, 15 MB of source tarballs). Heaviest: spatstat 4.3 MB, spatstat.data 2.9 MB, mcmc 1.5 MB.

Depends (1)

R >= 4.2.0

Imports (9)

methodsstatsspatstat spatstat.geomMatrixcoda mvtnorm MCMCpackparallel

LinkingTo (0)

none

Suggests (0)

none

Enhances (0)

none

Dependency license breakdown →

Reverse dependencies

0direct

0indirect

Nothing depends on this yet.

How these are counted

Code & Tests

Datasets

People & History

People (1)

Maximilian Hughes

Author, Maintainer, Contributor · added in 1.2

Maintainer since 1.0 (2012)

Listed in earlier versions (1)

Max Hughes

no longer listed · 1.0 to 1.1

Releases (3)

Pick two releases to compare their code metrics.

R
R 4.6.0 released · 2026-04-24
R
R 4.5.0 released · 2025-04-11
R
R 4.4.0 released · 2024-04-24
R
R 4.3.0 released · 2023-04-21
unarchivedReturned to CRAN
2022-09-25
1.2Latest
record
2022-09-25 · current release · diff ↗
R
R 4.2.0 released · 2022-04-22
archivedRemoved from CRAN
2022-03-19
check problems were not corrected in time
R
R 4.1.0 released · 2021-05-18
R
R 4.0.0 released · 2020-04-24
R
R 3.6.0 released · 2019-04-26
R
R 3.5.0 released · 2018-04-23
R
R 3.4.0 released · 2017-04-21
R
R 3.3.0 released · 2016-05-03
R
R 3.2.0 released · 2015-04-16
R
R 3.1.0 released · 2014-04-10

Show 4 earlier eventsHide 4 earlier events

R
R 3.0.0 released · 2013-04-03
1.1
record
2013-01-19 · diff ↗
1.0
record
2012-11-09
R
R 2.15.0 released · 2012-03-30

Package metadata

First published: 2012-11-09
Total releases: 3 / 14 yrs
License: GPL-2 OSI
Minimum R: ≥ 4.2.0
Bundled data: 1.2 MB / 3 files
Download size: 1.2 MB

Appears in task views

Medical Image Analysis

Cite

Cite this package

Run in R for the authors' preferred citation:

citation("adaptsmoFMRI")

Format

Hughes, M. (2022). adaptsmoFMRI: Adaptive Smoothing of FMRI Data (Version 1.2) [Computer software]. https://doi.org/10.32614/CRAN.package.adaptsmoFMRI

This package has no citation file, so citation() returns this entry built from DESCRIPTION.

Cite the R Observatory

For a number measured here: a download total, a coverage figure, an archival date.

Format

APA

Balamuta, J. J. (2026). R Observatory: Metrics for adaptsmoFMRI version 1.2 [Data set]. HJJB, LLC. Data release v2026-10-25. https://doi.org/10.5281/zenodo.21843040

From data release v2026-10-25, which the citation names so these numbers can be found later. More on citing and the projects behind them.

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