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TriLLIEM

Log-Linear Modelling of Triad Genotype Data

v0.1.1 · Mar 12, 2026 · MIT + file LICENSE
CRAN GitHub Mirror

Description

Triad Log-Linear modelling of Imprinting Environmental interactions, and Maternal effects (TriLLIEM). This is an implementation of the log-linear model described in a series of papers, see for example Ainsworth et al. (2010) <doi:10.1002/gepi.20547>.

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CRAN Check Status

14 OK
Show all 14 flavors
Flavor Status
r-devel-linux-x86_64-debian-clang OK
r-devel-linux-x86_64-debian-gcc OK
r-devel-linux-x86_64-fedora-clang OK
r-devel-linux-x86_64-fedora-gcc OK
r-devel-macos-arm64 OK
r-devel-windows-x86_64 OK
r-oldrel-macos-arm64 OK
r-oldrel-macos-x86_64 OK
r-oldrel-windows-x86_64 OK
r-patched-linux-x86_64 OK
r-release-linux-x86_64 OK
r-release-macos-arm64 OK
r-release-macos-x86_64 OK
r-release-windows-x86_64 OK

Check History

OK 14 OK · 0 NOTE · 0 WARNING · 0 ERROR · 0 FAILURE Mar 13, 2026
ERROR 8 OK · 0 NOTE · 0 WARNING · 5 ERROR · 0 FAILURE Mar 10, 2026
ERROR r-devel-macos-arm64

tests

Running ‘testthat.R’ [3s/3s]
Running the tests in ‘tests/testthat.R’ failed.
Complete output:
  > # This file is part of the standard setup for testthat.
  > # It is recommended that you do not modify it.
  > #
  > # Where should you do additional te
...[truncated]...
999999726
  + 0.0441000000000000003
  - 0.0440999999999999726
  + 0.0441000000000000003
  - 0.0440999999999999726
  + 0.0441000000000000003
  and 6 more ...
  
  
  [ FAIL 2 | WARN 0 | SKIP 10 | PASS 0 ]
  Error:
  ! Test failures.
  Execution halted
ERROR r-release-macos-arm64

tests

Running ‘testthat.R’ [3s/3s]
Running the tests in ‘tests/testthat.R’ failed.
Complete output:
  > # This file is part of the standard setup for testthat.
  > # It is recommended that you do not modify it.
  > #
  > # Where should you do additional te
...[truncated]...
999999726
  + 0.0441000000000000003
  - 0.0440999999999999726
  + 0.0441000000000000003
  - 0.0440999999999999726
  + 0.0441000000000000003
  and 6 more ...
  
  
  [ FAIL 2 | WARN 0 | SKIP 10 | PASS 0 ]
  Error:
  ! Test failures.
  Execution halted
ERROR r-oldrel-macos-arm64

tests

Running ‘testthat.R’ [3s/3s]
Running the tests in ‘tests/testthat.R’ failed.
Complete output:
  > # This file is part of the standard setup for testthat.
  > # It is recommended that you do not modify it.
  > #
  > # Where should you do additional te
...[truncated]...
...
  
    `actual$count[1:13]`: 234 112  84 102 120 37 42 35 98 40 and 3 more...
  `expected$count[1:13]`: 234 120 102  84 112 52 40 37 81 42           ...
  
  
  [ FAIL 2 | WARN 0 | SKIP 10 | PASS 0 ]
  Error:
  ! Test failures.
  Execution halted
ERROR r-oldrel-macos-x86_64

tests

Running ‘testthat.R’ [9s/11s]
Running the tests in ‘tests/testthat.R’ failed.
Complete output:
  > # This file is part of the standard setup for testthat.
  > # It is recommended that you do not modify it.
  > #
  > # Where should you do additional t
...[truncated]...
...
  
    `actual$count[1:13]`: 234 112  84 102 120 37 42 35 98 40 and 3 more...
  `expected$count[1:13]`: 234 120 102  84 112 52 40 37 81 42           ...
  
  
  [ FAIL 2 | WARN 0 | SKIP 10 | PASS 0 ]
  Error:
  ! Test failures.
  Execution halted
ERROR r-oldrel-windows-x86_64

tests

Running 'testthat.R' [16s]
Running the tests in 'tests/testthat.R' failed.
Complete output:
  > # This file is part of the standard setup for testthat.
  > # It is recommended that you do not modify it.
  > #
  > # Where should you do additional test
...[truncated]...
...
  
    `actual$count[1:13]`: 234 112  84 102 120 37 42 35 98 40 and 3 more...
  `expected$count[1:13]`: 234 120 102  84 112 52 40 37 81 42           ...
  
  
  [ FAIL 2 | WARN 0 | SKIP 10 | PASS 0 ]
  Error:
  ! Test failures.
  Execution halted

Dependency Network

Dependencies Reverse dependencies dplyr rlang Rdpack TriLLIEM

Version History

updated 0.1.1 ← 0.1.0 diff Mar 12, 2026
new 0.1.0 Mar 10, 2026