R Observatory: Metrics for SporeLag version 0.1.1

Balamuta, James Joseph

doi:10.5281/zenodo.21843040

SporeLag

0.1.1

Lagged and Moving-Average Exposure Features for Aeroallergen Epidemiology

0packages depend

74downloads / year

88.8%test coverage

12/12checks pass

Overview

About

Maintained by Félix E. Rivera-MarianiFirst published 2026-08-041 releasesCRAN page ↗GitHub ↗

Deterministic, group-safe utilities that transform daily environmental exposure series (pollen and spore counts, with support for other time-varying exposures such as ozone and particulate matter) into analysis-ready lagged and moving-average exposure features. Functions validate temporal regularity, assign ISO 8601 weeks and configurable seasons, impute missing daily values transparently, and construct lagged and windowed exposures suitable for environmental epidemiology and public health analyses.

Install

R (CRAN)pak (dev)Fedora (COPR)openSUSE (OBS)

install.packages("SporeLag", repos = "https://cloud.r-project.org/")

Installs the current CRAN release. Prebuilt binaries on Windows and macOS.

if (!requireNamespace("pak", quietly = TRUE))
  install.packages("pak", repos = "https://cloud.r-project.org/")
pak::pak("friveramariani/SporeLag")

Development version from friveramariani/SporeLag. Installs pak first if it is not already available.

# enable the iucar/cran COPR if it is not already present, then install
ls /etc/yum.repos.d/*iucar*cran*.repo >/dev/null 2>&1 \
  || sudo dnf copr enable -y iucar/cran
sudo dnf install -y R-CRAN-SporeLag

RPMs from the iucar/cran COPR, rebuilt from CRAN.

For install.packages() integration in R, also: sudo dnf install R-CoprManager

# add the autoCRAN OBS repo (Tumbleweed) if it is missing, then install
zypper -q lr | grep -qi autoCRAN \
  || sudo zypper addrepo https://download.opensuse.org/repositories/devel:/languages:/R:/autoCRAN/openSUSE_Tumbleweed/devel:languages:R:autoCRAN.repo
sudo zypper install -y R-SporeLag

RPMs auto-built from CRAN on openSUSE OBS (Tumbleweed).

Health

CRAN checks

12OK

Slowest check: 1.4 min · r-oldrel-windows-x86_64

Code health

Yes

Tests · ratio 0.90

88.8%

Coverage · measured lines

100%

Documentation · exports

3

Dependencies · direct

Check history

OK2026-08-05
7 OK · 0 NOTE · 0 WARNING · 0 ERROR · 0 FAILURE

Documentation

READMEYes · 481 wordsVignettesYes · dynamicpkgdown siteNoNEWSYes · 100% structuredCode of conductNoContributing guideNo

Examples that run: 100%
Documented parameters: 100%
Return-value docs: 100%
References docs: 0%

Downloads

74

CRAN downloads in the past year

Rank #24,731 · ~0/day · ~6/mo

SporeLag Releases R versions

Daily download trend is not available in this view yet.

7430 days

7490 days

741 year

Compare downloads with other packages →

Repository

GitHub ↗ friveramariani/sporelag

0Stars

0Forks

0Open issues

0Open PRs

2Releases

47Commits

2Contributors

47 commits · Last activity 2026-07-24

Repository practices

Upstream repositoryBeta

8 development-tooling and community-health practices detected across 6 families in the upstream repository

Checks run against github.com/friveramariani/sporelag on 2026-08-09.

Continuous integration (1)

GitHub Actions

Reproducibility and dev environment (1)

data-raw/

CRAN release process (2)

cran-comments.mdCRAN-SUBMISSION

Docs source (1)

README.Rmd

Show all practices

Research and citation (2)

CITATION.cffZenodo

Lint, format, editor (1)

RStudio project

How this is detected·Detection ruleset v1 (2026-07-18)

Development tooling

AI-assisted toolingBeta

Uses AI-assisted development tooling (declared in repo)

Earliest detected marker: copilot on 2026-07-13

copilotclaude

Most recent: claude on 2026-07-13

Evidence

claude: on 2026-07-13 · evidence D
copilot: on 2026-07-13 · evidence A, D, PR · sole bot-author seen

How this is detected·Detection ruleset v2 (updated 2026-07-29)

Dependencies

Declared dependencies

8 external dependencies (excludes base and recommended)

Depends (1)

R >= 4.1.0

Imports (3)

cli rlangstats

LinkingTo (0)

none

Suggests (6)

dplyr knitr lubridate rmarkdown spelling testthat (>= 3.0.0)

Enhances (0)

none

Dependency license breakdown →

Reverse dependencies

0direct

0indirect

Nothing depends on this yet.

Code & Tests

Datasets

People & History

People (1)

Maintainer (1)

Félix E. Rivera-Mariani

Author, Maintainer

Authors (1)

Félix E. Rivera-Mariani

Author, Maintainer

Package Timeline

1 release. R releases are shown for context.

0.1.1Latest
2026-08-04 · current release
R
R 4.6.0 released · 2026-04-24

Package metadata

First published: 2026-08-04
Total releases: 1 / 1 yrs
License: MIT + file LICENSE OSI
Minimum R: ≥ 4.1.0
Bundled data: 1.1 KB / 1 file
Download size: not tracked yet
Installed size: not tracked yet
With dependencies: not tracked yet

Cite

Cite this package

Run in R for the authors' preferred citation:

citation("SporeLag")

The authors publish a CITATION.cff, so they have said how they want this cited. Run citation() and use what it gives you.

Cite the R Observatory

For a number measured here: a download total, a coverage figure, an archival date.

Format

APA

Balamuta, J. J. (2026). R Observatory: Metrics for SporeLag version 0.1.1 [Data set]. HJJB, LLC. Data release v2026-08-11. https://doi.org/10.5281/zenodo.21843040

From data release v2026-08-11, which the citation names so these numbers can be found later. More on citing and the projects behind them.

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