SmartSVA
Fast and Robust Surrogate Variable Analysis
v0.1.3
·
May 28, 2017
·
GPL-3
Description
Introduces a fast and efficient Surrogate Variable Analysis algorithm that captures variation of unknown sources (batch effects) for high-dimensional data sets. The algorithm is built on the 'irwsva.build' function of the 'sva' package and proposes a revision on it that achieves an order of magnitude faster running time while trading no accuracy loss in return.
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CRAN Check Status
5
NOTE
9
OK
Show all 14 flavors
| Flavor | Status |
|---|---|
| r-devel-linux-x86_64-debian-clang | NOTE |
| r-devel-linux-x86_64-debian-gcc | NOTE |
| r-devel-linux-x86_64-fedora-clang | OK |
| r-devel-linux-x86_64-fedora-gcc | OK |
| r-devel-macos-arm64 | OK |
| r-devel-windows-x86_64 | OK |
| r-oldrel-macos-arm64 | NOTE |
| r-oldrel-macos-x86_64 | NOTE |
| r-oldrel-windows-x86_64 | NOTE |
| r-patched-linux-x86_64 | OK |
| r-release-linux-x86_64 | OK |
| r-release-macos-arm64 | OK |
| r-release-macos-x86_64 | OK |
| r-release-windows-x86_64 | OK |
Check details (5 non-OK)
NOTE
r-devel-linux-x86_64-debian-clang
CRAN incoming feasibility
Maintainer: ‘Jun Chen <Chen.Jun2@mayo.edu>’
No Authors@R field in DESCRIPTION.
Please add one, modifying
Authors@R: c(person(given = "Jun",
family = "Chen",
role = c("aut", "cre"),
email = "Chen.Jun2@mayo.edu"),
person(given = "Ehsan",
family = "Behnam",
role = "aut",
email = "behnamgh@usc.edu"))
as necessary.
NOTE
r-devel-linux-x86_64-debian-gcc
CRAN incoming feasibility
Maintainer: ‘Jun Chen <Chen.Jun2@mayo.edu>’
No Authors@R field in DESCRIPTION.
Please add one, modifying
Authors@R: c(person(given = "Jun",
family = "Chen",
role = c("aut", "cre"),
email = "Chen.Jun2@mayo.edu"),
person(given = "Ehsan",
family = "Behnam",
role = "aut",
email = "behnamgh@usc.edu"))
as necessary.
NOTE
r-oldrel-macos-arm64
LazyData
'LazyData' is specified without a 'data' directory
NOTE
r-oldrel-macos-x86_64
LazyData
'LazyData' is specified without a 'data' directory
NOTE
r-oldrel-windows-x86_64
LazyData
'LazyData' is specified without a 'data' directory
Check History
NOTE 9 OK · 5 NOTE · 0 WARNING · 0 ERROR · 0 FAILURE Mar 10, 2026
NOTE
r-devel-linux-x86_64-debian-clang
CRAN incoming feasibility
Maintainer: ‘Jun Chen <Chen.Jun2@mayo.edu>’
No Authors@R field in DESCRIPTION.
Please add one, modifying
Authors@R: c(person(given = "Jun",
family = "Chen",
role = c("aut", "cre"),
email = "Chen.Jun2@mayo.edu"),
person(given = "Ehsan",
family = "Behnam",
role = "aut",
email = "behnamgh@usc.edu"))
as necessary.
NOTE
r-devel-linux-x86_64-debian-gcc
CRAN incoming feasibility
Maintainer: ‘Jun Chen <Chen.Jun2@mayo.edu>’
No Authors@R field in DESCRIPTION.
Please add one, modifying
Authors@R: c(person(given = "Jun",
family = "Chen",
role = c("aut", "cre"),
email = "Chen.Jun2@mayo.edu"),
person(given = "Ehsan",
family = "Behnam",
role = "aut",
email = "behnamgh@usc.edu"))
as necessary.
NOTE
r-oldrel-macos-arm64
LazyData
'LazyData' is specified without a 'data' directory
NOTE
r-oldrel-macos-x86_64
LazyData
'LazyData' is specified without a 'data' directory
NOTE
r-oldrel-windows-x86_64
LazyData
'LazyData' is specified without a 'data' directory