R Observatory: Metrics for SegCorr version 1.2

Balamuta, James Joseph

doi:10.5281/zenodo.21843040

SegCorr

1.2

Detecting Correlated Genomic Regions

0packages depend

2Kdownloads / year

–test coverage

11/13checks pass

Overview

About

Maintained by Eleni Ioanna DelatolaFirst published 2015-02-103 releasesCRAN page ↗

Performs correlation matrix segmentation and applies a test procedure to detect highly correlated regions in gene expression.

Install

R (CRAN)Ubuntu (r2u)

install.packages("SegCorr", repos = "https://cloud.r-project.org/")

Installs the current CRAN release. Prebuilt binaries on Windows and macOS.

Release

# enable cranapt (r2u) if it is not already set up, then install
grep -rqs r2u.stat.illinois.edu /etc/apt/sources.list /etc/apt/sources.list.d/ \
  || curl -fsSL https://raw.githubusercontent.com/eddelbuettel/r2u/master/inst/scripts/add_cranapt_noble.sh | sudo bash
sudo apt install -y r-cran-segcorr

Fast Ubuntu binaries via r2u (no compilation). The cranapt setup runs once and is skipped when it is already enabled.

bspm (used by r2u) also needs make: sudo apt install make

Health

CRAN checks

2NOTE11OK

Failing flavors

NOTE r-devel-linux-x86_64-debian-clang
NOTE r-devel-linux-x86_64-debian-gcc

Slowest check: 1.0 min · r-oldrel-windows-x86_64

Code health

None

Tests · ratio 0.00

not tracked

Coverage

0%

Documentation · exports

2

Dependencies · direct

Check history

NOTE2026-03-10
12 OK · 2 NOTE · 0 WARNING · 0 ERROR · 0 FAILURE

Documentation

READMENoVignettesNopkgdown siteNoNEWSNoCode of conductNoContributing guideNo

Examples that run: 100%
Documented parameters: not tracked
Return-value docs: not tracked
References docs: 86%

Downloads

2K

CRAN downloads in the past year

Rank #20,877 · ~5/day · ~163/mo

Releases R versions

Daily download trend is not available in this view yet.

10530 days

52790 days

2K1 year

Compare downloads with other packages →

Also on97 r2u

Dependencies

Declared dependencies

1 external dependency (excludes base and recommended)

Depends (2)

jointsegmethods

Imports (0)

none

LinkingTo (0)

none

Suggests (0)

none

Enhances (0)

none

Dependency license breakdown →

Reverse dependencies

0direct

0indirect

Nothing depends on this yet.

Code & Tests

Datasets

People & History

People (0)

Author records are not tracked yet for this package.

Listed in earlier versions (6)

Eleni Ioanna Delatola

no longer listed · 1.0 to 1.2

Emilie Lebarbier

no longer listed · 1.0 to 1.2

Tristan Mary-Huard

no longer listed · 1.0 to 1.2

Francois Radvanyi

no longer listed · 1.0 to 1.2

Stephane Robin

no longer listed · 1.0 to 1.2

Jennifer Wong

no longer listed · 1.0 to 1.2

Package Timeline

3 releases. Pick two to compare their code metrics. R releases are shown for context.

R
R 4.6.0 released · 2026-04-24
R
R 4.5.0 released · 2025-04-11
R
R 4.4.0 released · 2024-04-24
R
R 4.3.0 released · 2023-04-21
R
R 4.2.0 released · 2022-04-22
R
R 4.1.0 released · 2021-05-18
R
R 4.0.0 released · 2020-04-24
R
R 3.6.0 released · 2019-04-26
R
R 3.5.0 released · 2018-04-23
1.2Latest
2017-12-17 · current release · diff ↗
R
R 3.4.0 released · 2017-04-21
R
R 3.3.0 released · 2016-05-03
1.1
2015-11-04 · diff ↗
R
R 3.2.0 released · 2015-04-16
1.0
2015-02-10
R
R 3.1.0 released · 2014-04-10

Package metadata

First published: 2015-02-10
Total releases: 3 / 11 yrs
License: GPL-2 OSI
Bundled data: 542 KB / 2 files
Download size: 264 KB
Installed size: not tracked yet
With dependencies: not tracked yet

Cite

Cite this package

Run in R for the authors' preferred citation:

citation("SegCorr")

Cite the R Observatory

For a number measured here: a download total, a coverage figure, an archival date.

Format

APA

Balamuta, J. J. (2026). R Observatory: Metrics for SegCorr version 1.2 [Data set]. HJJB, LLC. Data release v2026-08-18. https://doi.org/10.5281/zenodo.21843040

From data release v2026-08-18, which the citation names so these numbers can be found later. More on citing and the projects behind them.

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