R Observatory: Metrics for SEERaBomb version 2019.2

Balamuta, James Joseph

doi:10.5281/zenodo.21843040

SEERaBomb

2019.2

SEER and Atomic Bomb Survivor Data Analysis Tools

0packages depend

3.1Kdownloads / year

–test coverage

8/13checks pass

Overview

About

Maintained by Tomas RadivoyevitchFirst published 2012-06-1715 releasesCRAN page ↗

Creates SEER (Surveillance, Epidemiology and End Results) and A-bomb data binaries from ASCII sources and provides tools for estimating SEER second cancer risks. Methods are described in doi:10.1038/leu.2015.258.

Install

R (CRAN)Ubuntu (r2u)Fedora (COPR)openSUSE (OBS)

install.packages("SEERaBomb", repos = "https://cloud.r-project.org/")

Installs the current CRAN release. Prebuilt binaries on Windows and macOS.

Release

# enable cranapt (r2u) if it is not already set up, then install
grep -rqs r2u.stat.illinois.edu /etc/apt/sources.list /etc/apt/sources.list.d/ \
  || curl -fsSL https://raw.githubusercontent.com/eddelbuettel/r2u/master/inst/scripts/add_cranapt_noble.sh | sudo bash
sudo apt install -y r-cran-seerabomb

Fast Ubuntu binaries via r2u (no compilation). The cranapt setup runs once and is skipped when it is already enabled.

bspm (used by r2u) also needs make: sudo apt install make

# enable the iucar/cran COPR if it is not already present, then install
ls /etc/yum.repos.d/*iucar*cran*.repo >/dev/null 2>&1 \
  || sudo dnf copr enable -y iucar/cran
sudo dnf install -y R-CRAN-SEERaBomb

RPMs from the iucar/cran COPR, rebuilt from CRAN.

For install.packages() integration in R, also: sudo dnf install R-CoprManager

# add the autoCRAN OBS repo (Tumbleweed) if it is missing, then install
zypper -q lr | grep -qi autoCRAN \
  || sudo zypper addrepo https://download.opensuse.org/repositories/devel:/languages:/R:/autoCRAN/openSUSE_Tumbleweed/devel:languages:R:autoCRAN.repo
sudo zypper install -y R-SEERaBomb

RPMs auto-built from CRAN on openSUSE OBS (Tumbleweed).

Health

CRAN checks

5NOTE8OK

Failing flavors

NOTE r-devel-linux-x86_64-debian-clang
NOTE r-devel-linux-x86_64-debian-gcc
NOTE r-devel-linux-x86_64-fedora-clang
NOTE r-devel-linux-x86_64-fedora-gcc
NOTE r-devel-windows-x86_64

Slowest check: 5.6 min · r-oldrel-windows-x86_64

Code health

None

Tests · ratio 0.00

not tracked

Coverage

22

Dependencies · direct

Check history

NOTE2026-07-16
11 OK · 2 NOTE · 0 WARNING · 0 ERROR · 0 FAILURE
OK2026-06-09
13 OK · 0 NOTE · 0 WARNING · 0 ERROR · 0 FAILURE
ERROR2026-06-08
12 OK · 0 NOTE · 0 WARNING · 1 ERROR · 0 FAILURE
OK2026-05-02
13 OK · 0 NOTE · 0 WARNING · 0 ERROR · 0 FAILURE
ERROR2026-04-25
11 OK · 0 NOTE · 0 WARNING · 1 ERROR · 0 FAILURE

Show 5 earlier snapshots

OK2026-04-22
14 OK · 0 NOTE · 0 WARNING · 0 ERROR · 0 FAILURE
ERROR2026-04-18
13 OK · 0 NOTE · 0 WARNING · 1 ERROR · 0 FAILURE
OK2026-04-10
14 OK · 0 NOTE · 0 WARNING · 0 ERROR · 0 FAILURE
ERROR2026-04-09
13 OK · 0 NOTE · 0 WARNING · 1 ERROR · 0 FAILURE
OK2026-03-10
14 OK · 0 NOTE · 0 WARNING · 0 ERROR · 0 FAILURE

Documentation

READMENoVignettesNopkgdown siteNoNEWSYes · 0% structuredCode of conductNoContributing guideNo

Examples that run: 32%
Documented parameters: not tracked
Return-value docs: not tracked
References docs: 15%

Downloads

3.1K

CRAN downloads in the past year

Rank #11,736 · ~8/day · ~258/mo

Releases R versions

Daily download trend is not available in this view yet.

22130 days

84290 days

3.1K1 year

Compare downloads with other packages →

Also on384 r2u1 autocran

Dependencies

Declared dependencies

22 external dependencies (excludes base and recommended)

Depends (4)

dplyr ggplot2 rgl demography

Imports (18)

Rcpp reshape2mgcvtibble LaF DBI RSQLite openxlsx WriteXLS labelled scales forcats purrr readr tidyr stringr plyrsurvival

LinkingTo (1)

Rcpp

Suggests (1)

bbmle

Enhances (0)

none

Dependency license breakdown →

Reverse dependencies

0direct

0indirect

Nothing depends on this yet.

Code & Tests

Datasets

People & History

People (2)

Maintainer (1)

Tomas Radivoyevitch

Author, Maintainer

Authors (1)

Tomas Radivoyevitch

Author, Maintainer

Contributors (1)

R. Molenaar

Contributor · added in 2019.1

Package Timeline

15 releases. Pick two to compare their code metrics. R releases are shown for context.

R
R 4.6.0 released · 2026-04-24
R
R 4.5.0 released · 2025-04-11
R
R 4.4.0 released · 2024-04-24
R
R 4.3.0 released · 2023-04-21
R
R 4.2.0 released · 2022-04-22
R
R 4.1.0 released · 2021-05-18
R
R 4.0.0 released · 2020-04-24
2019.2Latest
2019-12-12 · current release · diff ↗
2019.1
2019-05-07 · diff ↗
R
R 3.6.0 released · 2019-04-26
2018.1
2018-05-11 · diff ↗
R
R 3.5.0 released · 2018-04-23
2017.2
2017-08-14 · diff ↗
2017.1
2017-04-26 · diff ↗
R
R 3.4.0 released · 2017-04-21
2016.2
2016-11-11 · diff ↗

Show 14 earlier events

R
R 3.3.0 released · 2016-05-03
2016.1
2016-04-25 · diff ↗
2015.2
2015-09-07 · diff ↗
2015.1
2015-05-05 · diff ↗
R
R 3.2.0 released · 2015-04-16
2014.4.1
2014-04-18 · diff ↗
R
R 3.1.0 released · 2014-04-10
2013.4.3
2013-12-12 · diff ↗
2013.4.1
2013-04-27 · diff ↗
2013.4.0
2013-04-26 · diff ↗
R
R 3.0.0 released · 2013-04-03
0.2.1
2012-06-26 · diff ↗
0.01.1
2012-06-17
R
R 2.15.0 released · 2012-03-30

Package metadata

First published: 2012-06-17
Total releases: 15 / 14 yrs
License: GPL (>= 2) OSI
Bundled data: 12 KB / 4 files
Download size: 544 KB
Installed size: not tracked yet
With dependencies: not tracked yet

Cite

Cite this package

Run in R for the authors' preferred citation:

citation("SEERaBomb")

Format

Radivoyevitch, T., & Molenaar, R. (2019). SEERaBomb: SEER and Atomic Bomb Survivor Data Analysis Tools (Version 2019.2) [Computer software]. https://doi.org/10.32614/CRAN.package.SEERaBomb

This is what citation() produces when a package has no citation file of its own. If it prints something else, use that.

Cite the R Observatory

For a number measured here: a download total, a coverage figure, an archival date.

Format

APA

Balamuta, J. J. (2026). R Observatory: Metrics for SEERaBomb version 2019.2 [Data set]. HJJB, LLC. Data release v2026-08-18. https://doi.org/10.5281/zenodo.21843040

From data release v2026-08-18, which the citation names so these numbers can be found later. More on citing and the projects behind them.

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