R Observatory: Metrics for SCORNET version 0.1.1

Balamuta, James Joseph

doi:10.5281/zenodo.21843040

SCORNET

0.1.1Package record

Semi-Supervised Calibration of Risk with Noisy Event Times

0packages depend

2.3Kdownloads / year

–test coverage

11/13flavors OK

Overview

About

Maintained by Yuri AhujaCRAN page ↗GitHub ↗Issues ↗

A consistent, semi-supervised, non-parametric survival curve estimator optimized for efficient use of Electronic Health Record (EHR) data with a limited number of current status labels. See van der Laan and Robins (1997) doi:10.2307/2670119.

Install

R (CRAN)pak (dev)Ubuntu (r2u)Fedora (COPR)openSUSE (OBS)

install.packages("SCORNET", repos = "https://cloud.r-project.org/")

Installs the current CRAN release. Prebuilt binaries on Windows and macOS.

if (!requireNamespace("pak", quietly = TRUE))
  install.packages("pak", repos = "https://cloud.r-project.org/")
pak::pak("celehs/SCORNET")

Development version from celehs/SCORNET. Installs pak first if it is not already available.

Release

# enable cranapt (r2u) if it is not already set up, then install
grep -rqs r2u.stat.illinois.edu /etc/apt/sources.list /etc/apt/sources.list.d/ \
  || curl -fsSL https://raw.githubusercontent.com/eddelbuettel/r2u/master/inst/scripts/add_cranapt_noble.sh | sudo bash
sudo apt install -y r-cran-scornet

Fast Ubuntu binaries via r2u (no compilation). The cranapt setup runs once and is skipped when it is already enabled. We list this channel from recorded r2u download activity rather than from a live index of the repository, so treat it as last known rather than guaranteed.

bspm (used by r2u) also needs make: sudo apt install make

# enable the iucar/cran COPR if it is not already present, then install
ls /etc/yum.repos.d/*iucar*cran*.repo >/dev/null 2>&1 \
  || sudo dnf copr enable -y iucar/cran
sudo dnf install -y R-CRAN-SCORNET

RPMs from the iucar/cran COPR, rebuilt from CRAN.

For install.packages() integration in R, also: sudo dnf install R-CoprManager

# add the autoCRAN OBS repo (Tumbleweed) if it is missing, then install
zypper -q lr | grep -qi autoCRAN \
  || sudo zypper addrepo https://download.opensuse.org/repositories/devel:/languages:/R:/autoCRAN/openSUSE_Tumbleweed/devel:languages:R:autoCRAN.repo
sudo zypper install -y R-SCORNET

RPMs auto-built from CRAN on openSUSE OBS (Tumbleweed). We list this channel from recorded autoCRAN download activity rather than from a live index of the repository, so treat it as last known rather than guaranteed.

Health

CRAN checks

2NOTE11OK

Check messages

NOTEdependencies in R coder-devel-linux-x86_64-fedora-clang, r-devel-linux-x86_64-fedora-gcc

Namespaces in Imports field not imported from:
  ‘Matrix’ ‘pracma’
All declared Imports should be used.

CRAN check page ↗

Slowest check: 3.0 min · r-devel-windows-x86_64

Status changes

NOTE11 OK, 2 NOTENow
NOTE9 OK, 5 NOTE2026-04-22
ERROR8 OK, 5 NOTE, 1 ERROR2026-04-18
NOTE9 OK, 5 NOTE2026-03-10

Advisories

none known

How this is measured·How advisories are found

Documentation

In release 0.1.1

READMEYes · 202 wordsVignettesYes · 1 · dynamicNEWSNoCitation fileNo

Help pages: 2includes a package overview page
Examples that run: no examples
Exported functions with examples: 0%
Documented parameters: 100%
Return-value docs: 100%
Help pages citing references: 0%

Vignettes (1)

Simulated Example HTML

How these are measured

Downloads

2.3K

CRAN downloads in the past year

Rank #21,710 · ~6/day · ~189/mo

Releases R versions

Daily download trend is not available in this view yet.

23830 days

60890 days

2.3K1 year

Compare downloads with other packages →

Also on338 r2u2 autocran

How downloads are counted

Repository

celehs/scornet ↗Account: celehs

3Stars

1Forks

1Open issues

0Open PRs

0Releases

30Commits

3Commit identities

License file reads as GPL-3.0 · 30 commits · Last activity 2025-04-11 · Default branch at 0.1.2, ahead of CRAN 0.1.1 (checked 2026-10-18)

Responsiveness

How these are sampled

PRs merged (all time): 100%
Median days to close, 50 most recently updated closed issues: not measured
Median days to close, 50 most recently updated closed PRs: 0

How these are measured

PracticesBeta

4 development-tooling and community-health practices detected across 2 families in the upstream repository

Checks run against github.com/celehs/scornet on 2026-10-18.

Docs source (3)

README.Rmdpkgdown

GitHub Pages site last deployed 2025-04-11

Lint, format, editor (1)

RStudio project

How this is detected·Detection ruleset v3 (2026-09-26)

Dependencies

Declared dependencies

8 external dependencies (excludes base and recommended)

Installing SCORNET adds 6 packages (2 with compiled code, 3.7 MB of source tarballs). Heaviest: Rcpp 1.8 MB, RcppArmadillo 1.0 MB, pracma 389 KB.

Depends (0)

none

Imports (7)

Matrixsurvivalpracma foreach doParallelparallelRcpp

LinkingTo (2)

Rcpp RcppArmadillo

Suggests (2)

knitr rmarkdown

Enhances (0)

none

Dependency license breakdown →

Reverse dependencies

0direct

0indirect

Nothing depends on this yet.

How these are counted

Code & Tests

People & History

People (1)

Yuri Ahuja

Author, Maintainer since 0.1.0 (2020)

Releases (2)

Pick two releases to compare their code metrics.

R
R 4.6.0 released · 2026-04-24
R
R 4.5.0 released · 2025-04-11
R
R 4.4.0 released · 2024-04-24
R
R 4.3.0 released · 2023-04-21
R
R 4.2.0 released · 2022-04-22
R
R 4.1.0 released · 2021-05-18
0.1.1Latest
record
2021-01-04 · current release · diff ↗
0.1.0
record
2020-11-12
R
R 4.0.0 released · 2020-04-24

Package metadata

First published: 2020-11-12
Total releases: 2 / 6 yrs
License: GPL-3 OSI
Download size: 32 KB

Cite

Cite this package

Run in R for the authors' preferred citation:

citation("SCORNET")

Format

Ahuja, Y. (2021). SCORNET: Semi-Supervised Calibration of Risk with Noisy Event Times (Version 0.1.1) [Computer software]. https://doi.org/10.32614/CRAN.package.SCORNET

This package has no citation file, so citation() returns this entry built from DESCRIPTION.

Cite the R Observatory

For a number measured here: a download total, a coverage figure, an archival date.

Format

APA

Balamuta, J. J. (2026). R Observatory: Metrics for SCORNET version 0.1.1 [Data set]. HJJB, LLC. Data release v2026-10-21. https://doi.org/10.5281/zenodo.21843040

From data release v2026-10-21, which the citation names so these numbers can be found later. More on citing and the projects behind them.

Report a problem with this page →