SAMBA
Selection and Misclassification Bias Adjustment for Logistic Regression Models
Description
Health research using data from electronic health records (EHR) has gained popularity, but misclassification of EHR-derived disease status and lack of representativeness of the study sample can result in substantial bias in effect estimates and can impact power and type I error for association tests. Here, the assumed target of inference is the relationship between binary disease status and predictors modeled using a logistic regression model. 'SAMBA' implements several methods for obtaining bias-corrected point estimates along with valid standard errors as proposed in Beesley and Mukherjee (2020) <doi:10.1101/2019.12.26.19015859>, currently under review.
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CRAN Check Status
Show all 14 flavors
| Flavor | Status |
|---|---|
| r-devel-linux-x86_64-debian-clang | NOTE |
| r-devel-linux-x86_64-debian-gcc | NOTE |
| r-devel-linux-x86_64-fedora-clang | OK |
| r-devel-linux-x86_64-fedora-gcc | OK |
| r-devel-macos-arm64 | OK |
| r-devel-windows-x86_64 | OK |
| r-oldrel-macos-arm64 | OK |
| r-oldrel-macos-x86_64 | OK |
| r-oldrel-windows-x86_64 | OK |
| r-patched-linux-x86_64 | OK |
| r-release-linux-x86_64 | OK |
| r-release-macos-arm64 | OK |
| r-release-macos-x86_64 | OK |
| r-release-windows-x86_64 | OK |
Check details (2 non-OK)
CRAN incoming feasibility
Maintainer: ‘Alexander Rix <alexrix@umich.edu>’
Found the following URLs which should use \doi (with the DOI name only):
File ‘approxdist.Rd’:
https://doi.org/10.1101/2019.12.26.19015859
File ‘nonlogistic.Rd’:
https://doi.org/10.1101/2019.12.26.19015859
File ‘obsloglik.Rd’:
https://doi.org/10.1101/2019.12.26.19015859
File ‘obsloglikEM.Rd’:
https://doi.org/10.1101/2019.12.26.19015859
File ‘sensitivity.Rd’:
https://doi.org/10.1101/2019.12.26.19015859
CRAN incoming feasibility
Maintainer: ‘Alexander Rix <alexrix@umich.edu>’
Found the following URLs which should use \doi (with the DOI name only):
File ‘approxdist.Rd’:
https://doi.org/10.1101/2019.12.26.19015859
File ‘nonlogistic.Rd’:
https://doi.org/10.1101/2019.12.26.19015859
File ‘obsloglik.Rd’:
https://doi.org/10.1101/2019.12.26.19015859
File ‘obsloglikEM.Rd’:
https://doi.org/10.1101/2019.12.26.19015859
File ‘sensitivity.Rd’:
https://doi.org/10.1101/2019.12.26.19015859
Check History
NOTE 12 OK · 2 NOTE · 0 WARNING · 0 ERROR · 0 FAILURE Mar 10, 2026
CRAN incoming feasibility
Maintainer: ‘Alexander Rix <alexrix@umich.edu>’
Found the following URLs which should use \doi (with the DOI name only):
File ‘approxdist.Rd’:
https://doi.org/10.1101/2019.12.26.19015859
File ‘nonlogistic.Rd’:
https://doi.org/10.1101/2019.12.26.19015859
File ‘obsloglik.Rd’:
https://doi.org/10.1101/2019.12.26.19015859
File ‘obsloglikEM.Rd’:
https://doi.org/10.1101/2019.12.26.19015859
File ‘sensitivity.Rd’:
https://doi.org/10.1101/2019.12.26.19015859
CRAN incoming feasibility
Maintainer: ‘Alexander Rix <alexrix@umich.edu>’
Found the following URLs which should use \doi (with the DOI name only):
File ‘approxdist.Rd’:
https://doi.org/10.1101/2019.12.26.19015859
File ‘nonlogistic.Rd’:
https://doi.org/10.1101/2019.12.26.19015859
File ‘obsloglik.Rd’:
https://doi.org/10.1101/2019.12.26.19015859
File ‘obsloglikEM.Rd’:
https://doi.org/10.1101/2019.12.26.19015859
File ‘sensitivity.Rd’:
https://doi.org/10.1101/2019.12.26.19015859