Rpadrino

0.0.5

Interact with the 'PADRINO' IPM Database

0packages depend

2.7Kdownloads / year

79.5%test coverage

12/13checks pass

Overview

About

Maintained by Sam LevinFirst published 2021-11-155 releasesCRAN page ↗GitHub ↗

'PADRINO' houses textual representations of Integral Projection Models which can be converted from their table format into full kernels to reproduce or extend an already published analysis. 'Rpadrino' is an R interface to this database. For more information on Integral Projection Models, see Easterling et al. (2000) doi:10.1890/0012-9658(2000)081[0694:SSSAAN]2.0.CO;2, Merow et al. (2013) doi:10.1111/2041-210X.12146, Rees et al. (2014) doi:10.1111/1365-2656.12178, and Metcalf et al. (2015) doi:10.1111/2041-210X.12405. See Levin et al. (2021) for more information on 'ipmr', the engine that powers model reconstruction doi:10.1111/2041-210X.13683.

Install

R (CRAN)pak (dev)Ubuntu (r2u)Fedora (COPR)openSUSE (OBS)

install.packages("Rpadrino", repos = "https://cloud.r-project.org/")

Installs the current CRAN release. Prebuilt binaries on Windows and macOS.

if (!requireNamespace("pak", quietly = TRUE))
  install.packages("pak", repos = "https://cloud.r-project.org/")
pak::pak("padrinoDB/Rpadrino")

Development version from padrinoDB/Rpadrino. Installs pak first if it is not already available.

Release

# enable cranapt (r2u) if it is not already set up, then install
grep -rqs r2u.stat.illinois.edu /etc/apt/sources.list /etc/apt/sources.list.d/ \
  || curl -fsSL https://raw.githubusercontent.com/eddelbuettel/r2u/master/inst/scripts/add_cranapt_noble.sh | sudo bash
sudo apt install -y r-cran-rpadrino

Fast Ubuntu binaries via r2u (no compilation). The cranapt setup runs once and is skipped when it is already enabled.

bspm (used by r2u) also needs make: sudo apt install make

# enable the iucar/cran COPR if it is not already present, then install
ls /etc/yum.repos.d/*iucar*cran*.repo >/dev/null 2>&1 \
  || sudo dnf copr enable -y iucar/cran
sudo dnf install -y R-CRAN-Rpadrino

RPMs from the iucar/cran COPR, rebuilt from CRAN.

For install.packages() integration in R, also: sudo dnf install R-CoprManager

# add the autoCRAN OBS repo (Tumbleweed) if it is missing, then install
zypper -q lr | grep -qi autoCRAN \
  || sudo zypper addrepo https://download.opensuse.org/repositories/devel:/languages:/R:/autoCRAN/openSUSE_Tumbleweed/devel:languages:R:autoCRAN.repo
sudo zypper install -y R-Rpadrino

RPMs auto-built from CRAN on openSUSE OBS (Tumbleweed).

Health

CRAN checks

1NOTE12OK

Failing flavors

NOTE r-devel-linux-x86_64-debian-gcc

Slowest check: 5.8 min · r-devel-linux-x86_64-fedora-clang

Code health

Yes

Tests · ratio 0.20

79.5%

Coverage · measured lines

98%

Documentation · exports

Dependencies · direct

Check history

NOTE2026-08-01
12 OK · 1 NOTE · 0 WARNING · 0 ERROR · 0 FAILURE
OK2026-03-10
14 OK · 0 NOTE · 0 WARNING · 0 ERROR · 0 FAILURE

Documentation

READMENoVignettesYes · dynamicpkgdown siteNoNEWSYes · 100% structuredCode of conductNoContributing guideNo

Examples that run: 33%
Documented parameters: 80%
Return-value docs: 100%
References docs: 0%

Downloads

2.7K

CRAN downloads in the past year

Rank #17,000 · ~7/day · ~225/mo

Releases R versions

Daily download trend is not available in this view yet.

18330 days

63690 days

2.7K1 year

Compare downloads with other packages →

Also on94 r2u2 autocran

Repository

GitHub ↗ padrinodb/rpadrino

3Stars

0Forks

1Open issues

0Open PRs

5Releases

192Commits

1Contributors

192 commits · Last activity 2023-09-22

Stars over time

2025-03-22 · 32026-07-07 · 3

Repository practices

Upstream repositoryBeta

7 development-tooling and community-health practices detected across 7 families in the upstream repository

Checks run against github.com/padrinodb/rpadrino on 2026-07-31.

Continuous integration (1)

GitHub Actions

Reproducibility and dev environment (1)

data-raw/

CRAN release process (1)

cran-comments.md

Docs source (1)

README.Rmd

Show all practices

Lint, format, editor (1)

RStudio project

Coverage (1)

Codecov

Git structural (1)

.gitattributes

How this is detected·Detection ruleset v1 (2026-07-18)

Dependencies

Declared dependencies

14 external dependencies (excludes base and recommended)

Depends (2)

R >= 3.4.0ipmr

Imports (10)

curl ggplot2 magrittr mvtnorm purrr rlang rmarkdowntoolstruncdistutils

LinkingTo (0)

none

Suggests (5)

covr knitr maps roxygen2 testthat

Enhances (0)

none

Dependency license breakdown →

Reverse dependencies

0direct

0indirect

Nothing depends on this yet.

Code & Tests

People & History

People (7)

Maintainer (1)

Sam Levin

Author, Maintainer

Authors (7)

Author, Maintainer

Author

Author

Author

Author

Author

Roberto Salguero-Gomez

Author

Package Timeline

5 releases. Pick two to compare their code metrics. R releases are shown for context.

R
R 4.6.0 released · 2026-04-24
R
R 4.5.0 released · 2025-04-11
R
R 4.4.0 released · 2024-04-24
0.0.5Latest
2023-09-23 · current release · diff ↗
unarchivedReturned to CRAN
2023-09-23
archivedRemoved from CRAN
2023-09-19
policy violation On Internet access
R
R 4.3.0 released · 2023-04-21
0.0.4
2022-04-30 · diff ↗
R
R 4.2.0 released · 2022-04-22
0.0.3
2021-12-10 · diff ↗
unarchivedReturned to CRAN
2021-12-10
archivedRemoved from CRAN
2021-11-30
check problems were not corrected in time C stack usage
0.0.2
2021-11-16 · diff ↗
0.0.1
2021-11-15
R
R 4.1.0 released · 2021-05-18

Package metadata

First published: 2021-11-15
Total releases: 5 / 5 yrs
License: GPL-3 OSI
Minimum R: ≥ 3.4.0
Bundled data: 41 KB / 1 file
Download size: 266 KB
Installed size: not tracked yet
With dependencies: not tracked yet

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