Rnaught

Estimate the Basic Reproduction Number (R0)

v0.1.0 · Sep 2, 2025 · AGPL (>= 3)

Description

A collection of methods for estimating the basic reproduction number (R0) of infectious diseases. Features a web application to interface with the estimators. Uses the models from: Fisman et al. (2013) <DOI:10.1371/journal.pone.0083622>, Bettencourt and Ribeiro (2008) <DOI:10.1371/journal.pone.0002185>, and White and Pagano (2008) <DOI:10.1002/sim.3136>. Includes datasets for Canadian national and provincial COVID-19 case counts provided by Berry et al. (2021) <DOI:10.1038/s41597-021-00955-2>.

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Flavor	Status	Time
r-devel-linux-x86_64-debian-clang	OK	41.6s
r-devel-linux-x86_64-debian-gcc	OK	32.7s
r-devel-linux-x86_64-fedora-clang	OK	67.8s
r-devel-linux-x86_64-fedora-gcc	OK	120.3s
r-devel-windows-x86_64	OK	67s
r-oldrel-macos-arm64	OK
r-oldrel-macos-x86_64	OK	69s
r-oldrel-windows-x86_64	OK	74s
r-patched-linux-x86_64	OK	37.5s
r-release-linux-x86_64	OK
r-release-macos-arm64	OK	18s
r-release-macos-x86_64	OK	59s
r-release-windows-x86_64	OK	65s

Check History

OK 13 OK · 0 NOTE · 0 WARNING · 0 ERROR · 0 FAILURE May 10, 2026

WARNING 12 OK · 0 NOTE · 1 WARNING · 0 ERROR · 0 FAILURE May 9, 2026

WARNING r-devel-linux-x86_64-debian-gcc

PDF version of manual

LaTeX errors when creating PDF version.
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OK 14 OK · 0 NOTE · 0 WARNING · 0 ERROR · 0 FAILURE Mar 10, 2026

Version History

1 tracked

new 0.1.0 Mar 10, 2026

R Observatory began tracking this package on Mar 10, 2026; it first appeared on CRAN Sep 2, 2025. Releases before tracking aren’t shown.