R Observatory: Metrics for RepeatedHighDim version 2.5.0

Balamuta, James Joseph

doi:10.5281/zenodo.21843040

RepeatedHighDim

2.5.0Package record

Methods for High-Dimensional Repeated Measures Data

0packages depend

3Kdownloads / year

–test coverage

13/13flavors OK

Overview

About

Maintained by Klaus JungCRAN page ↗Website ↗

A toolkit for the analysis of high-dimensional repeated measurements, providing functions for outlier detection, differential expression analysis, gene-set tests, and binary random data generation.

Install

R (CRAN)Ubuntu (r2u)Fedora (COPR)openSUSE (OBS)

install.packages("RepeatedHighDim", repos = "https://cloud.r-project.org/")

Installs the current CRAN release. Prebuilt binaries on Windows and macOS.

Release

# enable cranapt (r2u) if it is not already set up, then install
grep -rqs r2u.stat.illinois.edu /etc/apt/sources.list /etc/apt/sources.list.d/ \
  || curl -fsSL https://raw.githubusercontent.com/eddelbuettel/r2u/master/inst/scripts/add_cranapt_noble.sh | sudo bash
sudo apt install -y r-cran-repeatedhighdim

Fast Ubuntu binaries via r2u (no compilation). The cranapt setup runs once and is skipped when it is already enabled. We list this channel from recorded r2u download activity rather than from a live index of the repository, so treat it as last known rather than guaranteed.

bspm (used by r2u) also needs make: sudo apt install make

# enable the iucar/cran COPR if it is not already present, then install
ls /etc/yum.repos.d/*iucar*cran*.repo >/dev/null 2>&1 \
  || sudo dnf copr enable -y iucar/cran
sudo dnf install -y R-CRAN-RepeatedHighDim

RPMs from the iucar/cran COPR, rebuilt from CRAN.

For install.packages() integration in R, also: sudo dnf install R-CoprManager

# add the autoCRAN OBS repo (Tumbleweed) if it is missing, then install
zypper -q lr | grep -qi autoCRAN \
  || sudo zypper addrepo https://download.opensuse.org/repositories/devel:/languages:/R:/autoCRAN/openSUSE_Tumbleweed/devel:languages:R:autoCRAN.repo
sudo zypper install -y R-RepeatedHighDim

RPMs auto-built from CRAN on openSUSE OBS (Tumbleweed). We list this channel from recorded autoCRAN download activity rather than from a live index of the repository, so treat it as last known rather than guaranteed.

Health

CRAN checks

13OK

CRAN check page ↗

Slowest check: 7.5 min · r-oldrel-windows-x86_64

Status changes

OK13 OK2026-08-05
NOTE12 OK, 1 NOTE2026-08-01
OK13 OK2026-06-09
ERROR12 OK, 1 ERROR2026-06-08
OK14 OK2026-04-10

Show 2 earlier changesHide 2 earlier changes

ERROR13 OK, 1 ERROR2026-04-09
OK14 OK2026-03-10

Advisories

none known

How this is measured·How advisories are found

Documentation

In release 2.5.0

READMEYes · 24 wordsVignettesNoNEWSNoCitation fileNoWebsiteYes

Help pages: 35 (11 internal)includes a package overview page
Examples that run: 52%11 run in a plain check · 10 never run
Exported functions with examples: 91%
Documented parameters: 96%
Return-value docs: 83%
Help pages citing references: 51%

How these are measured

Downloads

3K

CRAN downloads in the past year

Rank #14,025 · ~8/day · ~246/mo

Releases R versions

Daily download trend is not available in this view yet.

33530 days

83990 days

3K1 year

Compare downloads with other packages →

Also on91 r2u4 autocran

How downloads are counted

Dependencies

Declared dependencies

21 external dependencies (excludes base and recommended)

Installing RepeatedHighDim adds 181 packages (102 with compiled code, 165 MB of source tarballs). Heaviest: BH 14 MB, stringi 11 MB, ggplot2 6.0 MB. 1 more not on CRAN is not measured.

Depends (1)

R >= 3.5

Imports (24)

alphahull circlize ComplexHeatmap ddalpha dplyr FNN geometry ggplot2graphicsgrDevicesMASSmvtnorm netmetanlmepatchwork progress RColorBrewer rgl rlang scales Seurat SeuratObjectstatsutils

LinkingTo (0)

none

Suggests (3)

BiocManager invgamma limma

Enhances (0)

none

Dependency license breakdown →

Reverse dependencies

0direct

0indirect

Nothing depends on this yet.

How these are counted

Code & Tests

People & History

People (3)

Klaus Jung

Author, Maintainer since at least 1.01 (2013)

Jochen Kruppa

Author · added in 2.2.0

Sergej Ruff

Author · added in 2.2.0

Releases (7)

Pick two releases to compare their code metrics.

R
R 4.6.0 released · 2026-04-24
2.5.0Latest
record
2026-01-13 · current release · diff ↗
2.4.0
record
2025-04-14 · diff ↗ ·
added 3 exports
scTC_bpplot, scTC_trim_effect, scTrimClust
R
R 4.5.0 released · 2025-04-11
2.3.0
record
2024-04-25 · diff ↗ ·
added 1 export
netRNA
R
R 4.4.0 released · 2024-04-24
unarchivedReturned to CRAN
2023-06-29
2.2.0
record
2023-06-29 · diff ↗ ·
removed 3 exports
RepeatedHighDim, TestStatSP, TestStatSimple

added 18 exports
GA_diagplot, RHighDim, bag, check_limma, depmed, fc_ci, fc_plot, gem, gridfun, hldepth, iter_matrix, loop, rho_bounds, rmvbinary_EP, rmvbinary_QA, sequence_probs, start_matrix, summary_RHD
R
R 4.3.0 released · 2023-04-21
archivedRemoved from CRAN
2022-05-24
email to the maintainer is undeliverable
R
R 4.2.0 released · 2022-04-22
R
R 4.1.0 released · 2021-05-18
R
R 4.0.0 released · 2020-04-24
R
R 3.6.0 released · 2019-04-26
R
R 3.5.0 released · 2018-04-23
R
R 3.4.0 released · 2017-04-21

Show 11 earlier eventsHide 11 earlier events

R
R 3.3.0 released · 2016-05-03
R
R 3.2.0 released · 2015-04-16
R
R 3.1.0 released · 2014-04-10
2.0.0
record
2013-08-21 · diff ↗ ·
added 1 export
GlobTestMissing
R
R 3.0.0 released · 2013-04-03
1.01
record
2013-03-11 · diff ↗ ·
removed 1 export
summary.RHD
R
R 2.15.0 released · 2012-03-30
R
R 2.14.0 released · 2011-10-31
R
R 2.13.0 released · 2011-04-13
1.0
record
2011-03-14
R
R 2.12.0 released · 2010-10-15

Package metadata

First published: 2011-03-14
Total releases: 7 / 15 yrs
License: GPL (>= 3) OSI
Minimum R: ≥ 3.5
Download size: 1.5 MB

Cite

Cite this package

Run in R for the authors' preferred citation:

citation("RepeatedHighDim")

Format

Jung, K., Kruppa, J., & Ruff, S. (2026). RepeatedHighDim: Methods for High-Dimensional Repeated Measures Data (Version 2.5.0) [Computer software]. https://doi.org/10.32614/CRAN.package.RepeatedHighDim

This package has no citation file, so citation() returns this entry built from DESCRIPTION.

Cite the R Observatory

For a number measured here: a download total, a coverage figure, an archival date.

Format

APA

Balamuta, J. J. (2026). R Observatory: Metrics for RepeatedHighDim version 2.5.0 [Data set]. HJJB, LLC. Data release v2026-10-22. https://doi.org/10.5281/zenodo.21843040

From data release v2026-10-22, which the citation names so these numbers can be found later. More on citing and the projects behind them.

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