R Observatory: Metrics for RPPanalyzer version 1.4.9

Balamuta, James Joseph

doi:10.5281/zenodo.21843040

RPPanalyzer

1.4.9

Reads, Annotates, and Normalizes Reverse Phase Protein Array Data

0packages depend

3.2Kdownloads / year

–test coverage

11/13checks pass

Overview

About

Maintained by Torsten SchoepsFirst published 2010-01-1819 releasesCRAN page ↗

Reads in sample description and slide description files and annotates the expression values taken from GenePix results files (text file format used by many microarray scanner and software providers). After normalization data can be visualized as boxplot, heatmap or dotplot.

Install

R (CRAN)Ubuntu (r2u)

install.packages("RPPanalyzer", repos = "https://cloud.r-project.org/")

Installs the current CRAN release. Prebuilt binaries on Windows and macOS.

Release

# enable cranapt (r2u) if it is not already set up, then install
grep -rqs r2u.stat.illinois.edu /etc/apt/sources.list /etc/apt/sources.list.d/ \
  || curl -fsSL https://raw.githubusercontent.com/eddelbuettel/r2u/master/inst/scripts/add_cranapt_noble.sh | sudo bash
sudo apt install -y r-cran-rppanalyzer

Fast Ubuntu binaries via r2u (no compilation). The cranapt setup runs once and is skipped when it is already enabled.

bspm (used by r2u) also needs make: sudo apt install make

Health

CRAN checks

2NOTE11OK

Failing flavors

NOTE r-devel-linux-x86_64-debian-clang
NOTE r-devel-linux-x86_64-debian-gcc

Slowest check: 4.1 min · r-oldrel-windows-x86_64

Code health

None

Tests · ratio 0.00

not tracked

Coverage

100%

Documentation · exports

13

Dependencies · direct

Check history

NOTE2026-06-09
11 OK · 2 NOTE · 0 WARNING · 0 ERROR · 0 FAILURE
ERROR2026-06-08
11 OK · 1 NOTE · 0 WARNING · 1 ERROR · 0 FAILURE
NOTE2026-03-10
9 OK · 5 NOTE · 0 WARNING · 0 ERROR · 0 FAILURE

Documentation

READMENoVignettesYes · dynamicpkgdown siteNoNEWSNoCode of conductNoContributing guideNo

Examples that run: 0%
Documented parameters: 99%
Return-value docs: 100%
References docs: 5%

Downloads

3.2K

CRAN downloads in the past year

Rank #12,066 · ~9/day · ~267/mo

Releases R versions

Daily download trend is not available in this view yet.

21030 days

82590 days

3.2K1 year

Compare downloads with other packages →

Also on120 r2u

Dependencies

Declared dependencies

7 external dependencies (excludes base and recommended)

Depends (1)

R >= 2.14

Imports (13)

quantreg limmalatticestats4gam gplotsgridggplot2 Hmisc Biobasemethodsutilsgraphics

LinkingTo (0)

none

Suggests (0)

none

Enhances (0)

none

Dependency license breakdown →

Reverse dependencies

0direct

0indirect

Nothing depends on this yet.

Code & Tests

Datasets

People & History

People (0)

Author records are not tracked yet for this package.

Listed in earlier versions (1)

Heiko Mannsperger with contributions of Stephan Gade

no longer listed · 2.10.1 to 1.4.9

Package Timeline

19 releases. Pick two to compare their code metrics. R releases are shown for context.

R
R 4.6.0 released · 2026-04-24
R
R 4.5.0 released · 2025-04-11
R
R 4.4.0 released · 2024-04-24
1.4.9Latest
2024-01-25 · current release · diff ↗
1.4.8
2023-08-28 · diff ↗
R
R 4.3.0 released · 2023-04-21
R
R 4.2.0 released · 2022-04-22
R
R 4.1.0 released · 2021-05-18
1.4.7
2020-12-17 · diff ↗
1.4.6
2020-07-15 · diff ↗
R
R 4.0.0 released · 2020-04-24
R
R 3.6.0 released · 2019-04-26
R
R 3.5.0 released · 2018-04-23
1.4.5
2018-01-15 · diff ↗
1.4.4
2017-06-26 · diff ↗
R
R 3.4.0 released · 2017-04-21

Show 24 earlier events

R
R 3.3.0 released · 2016-05-03
1.4.3
2016-02-11 · diff ↗
1.4.1
2015-06-25 · diff ↗
R
R 3.2.0 released · 2015-04-16
archivedRemoved from CRAN
2014-12-07
maintainer address <christian.bender@tron-mainz.de> bounced
1.4
2014-11-05 · diff ↗
1.3
2014-06-29 · diff ↗
R
R 3.1.0 released · 2014-04-10
1.2.2
2014-01-21 · diff ↗
R
R 3.0.0 released · 2013-04-03
1.0.5
2012-10-03 · diff ↗
R
R 2.15.0 released · 2012-03-30
R
R 2.14.0 released · 2011-10-31
2.13.2
2011-08-02 · diff ↗
1.0.4
2011-08-02 · diff ↗
R
R 2.13.0 released · 2011-04-13
R
R 2.12.0 released · 2010-10-15
1.0.3
2010-05-28 · diff ↗
2.11.1
2010-05-10 · diff ↗
R
R 2.11.0 released · 2010-04-22
1.0.2
2010-01-22 · diff ↗
1.0
2010-01-18 · diff ↗
2.10.1
2009-11-11
R
R 2.10.0 released · 2009-10-26

Package metadata

First published: 2010-01-18
Total releases: 19 / 16 yrs
License: LGPL
Minimum R: ≥ 2.14
Bundled data: 301 KB / 7 files
Download size: 1.6 MB
Installed size: not tracked yet
With dependencies: not tracked yet

Cite

Cite this package

Run in R for the authors' preferred citation:

citation("RPPanalyzer")

Cite the R Observatory

For a number measured here: a download total, a coverage figure, an archival date.

Format

APA

Balamuta, J. J. (2026). R Observatory: Metrics for RPPanalyzer version 1.4.9 [Data set]. HJJB, LLC. Data release v2026-08-16. https://doi.org/10.5281/zenodo.21843040

From data release v2026-08-16, which the citation names so these numbers can be found later. More on citing and the projects behind them.

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